RNA–Protein interactions for RNA: ENST00000390329.3

AP000346.1-201, humanhuman

TSL 5 BASIC

Gene AP000346.1, Length 1,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.1-201ENST00000390329 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
AP000346.1-201ENST00000390329 CACNB3P54284 484 aa13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 CHRNDQ07001 517 aa13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 LRRFIP2Q9Y608 721 aaKnown RBP13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
AP000346.1-201ENST00000390329 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 INPP5BP32019 993 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 TNNI2P48788 182 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 PPATQ06203 517 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 MYLIPQ8WY64 445 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 TTF2Q9UNY4 1162 aaKnown RBP13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
AP000346.1-201ENST00000390329 MGAMO43451 1857 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 UBTFL1P0CB47 393 aaPredicted RBP13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 ZNF697Q5TEC3 545 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 GPAT2Q6NUI2 795 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 SEMA6BQ9H3T3 888 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 SERPINA10Q9UK55 444 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 CDH23Q9H251 3354 aa13.57□□□□□ -0.24
AP000346.1-201ENST00000390329 TMEM265A0A087WTH1 108 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 RFX5P48382 616 aaPredicted RBP13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 IRF5Q13568 498 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 KLHDC4Q8TBB5 520 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
AP000346.1-201ENST00000390329 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 CRKP46108 304 aa13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 TRIM32Q13049 653 aa13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 GRIK5Q16478 980 aa13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 C15orf52Q6ZUT6 534 aaKnown RBP13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
AP000346.1-201ENST00000390329 DOCK3Q8IZD9 2030 aa13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 IFIT5Q13325 482 aaKnown RBP13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 COG6Q9Y2V7 657 aa13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 PFASO15067 1338 aa13.54□□□□□ -0.24
AP000346.1-201ENST00000390329 NCOR1O75376 2440 aa13.53□□□□□ -0.24
AP000346.1-201ENST00000390329 GNAI3P08754 354 aa13.53□□□□□ -0.24
AP000346.1-201ENST00000390329 MAP3K12Q12852 859 aa13.53□□□□□ -0.24
AP000346.1-201ENST00000390329 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
AP000346.1-201ENST00000390329 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 MTX1Q13505 466 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 TTYH1Q9H313 450 aaPredicted RBP13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 HMX1Q9NP08 348 aaPredicted RBP13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 OGDHLQ9ULD0 1010 aa13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 DDX60LQ5H9U9 1706 aaKnown RBP13.52□□□□□ -0.25
AP000346.1-201ENST00000390329 MYH13Q9UKX3 1938 aa13.51□□□□□ -0.25
AP000346.1-201ENST00000390329 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
AP000346.1-201ENST00000390329 GNAI2P04899 355 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 FOSL2P15408 326 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 DCAF15Q66K64 600 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 COA7Q96BR5 231 aa13.5□□□□□ -0.25
AP000346.1-201ENST00000390329 HMGCRP04035 888 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 LDHAL6AQ6ZMR3 332 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 SIL1Q9H173 461 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
AP000346.1-201ENST00000390329 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 CXCL11O14625 94 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 COL6A1P12109 1028 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 GYG1P46976 350 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 SHHQ15465 462 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 FAM83AQ86UY5 434 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 ANKRD13CQ8N6S4 541 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 CNNM1Q9NRU3 951 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
AP000346.1-201ENST00000390329 POLA2Q14181 598 aa13.47□□□□□ -0.25
AP000346.1-201ENST00000390329 C9orf50Q5SZB4 431 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms