RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 ATP10AO60312 1499 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 HOXB7P09629 217 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 ITGA6P23229 1130 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 MTUS1Q9ULD2 1270 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 VAMP4O75379 141 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 BRDTQ58F21 947 aaPredicted RBP13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 RLBP1P12271 317 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 TRIM14Q14142 442 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 ZNF174Q15697 407 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 CFAP157Q5JU67 520 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 UBL4BQ8N7F7 174 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
KCNQ3-201ENST00000388996 AKR1B15C9JRZ8 316 aaPredicted RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 STK10O94804 968 aaKnown RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 IFT81Q8WYA0 676 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 NDC80O14777 642 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 MNAT1P51948 309 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 LLPHQ9BRT6 129 aaKnown RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 KIFC2Q96AC6 838 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 EXOC7Q9UPT5 735 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 DEXIO95424 95 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 EYA1Q99502 592 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 SMIM23A6NLE4 172 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 KARSQ15046 597 aaKnown RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 CSRNP2Q9H175 543 aa13.78□□□□□ -0.2
KCNQ3-201ENST00000388996 INF2Q27J81 1249 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 EYA2O00167 538 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 ANO1Q5XXA6 986 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 DDX21Q9NR30 783 aaKnown RBP eCLIP13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 PZPP20742 1482 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 TERF1P54274 439 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 CALCOCO2Q13137 446 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 LIN9Q5TKA1 542 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 TMEM87BQ96K49 555 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 PSMC4P43686 418 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 HS1BP3Q53T59 392 aa13.77□□□□□ -0.2
KCNQ3-201ENST00000388996 CFAP58Q5T655 872 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 A0A1B0GUL7 405 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 SPOPO43791 374 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 GCP02774 474 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 ADCY7P51828 1080 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 RSPH14Q9UHP6 348 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 CROCC2H7BZ55 1655 aa13.77□□□□□ -0.21
KCNQ3-201ENST00000388996 B4E1Z4 1266 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 CRCPO75575 148 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 FCHSD1Q86WN1 690 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 WWC3Q9ULE0 1092 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 CDC42BPAQ5VT25 1732 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 SAMD15Q9P1V8 674 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 TRPC3Q13507 836 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 E7EVH7 732 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 MYL5Q02045 173 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 SLC1A4P43007 532 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 NKIRAS1Q9NYS0 192 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 GJA3Q9Y6H8 435 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 TUBBP07437 444 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 RHOXF2BP0C7M4 288 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 TBC1D31Q96DN5 1066 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 CFAP57Q96MR6 1250 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 FNBP1Q96RU3 617 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 RHOXF2Q9BQY4 288 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 GPAA1O43292 621 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
KCNQ3-201ENST00000388996 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 TESK2Q96S53 571 aa13.75□□□□□ -0.21
KCNQ3-201ENST00000388996 NOD1Q9Y239 953 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms