RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 GPAT2Q6NUI2 795 aa22.15■■□□□ 1.14
RPUSD3-201ENST00000383820 FASTKD5Q7L8L6 764 aaKnown RBP22.15■■□□□ 1.14
RPUSD3-201ENST00000383820 PICK1Q9NRD5 415 aa22.15■■□□□ 1.14
RPUSD3-201ENST00000383820 ABCF2Q9UG63 623 aa22.15■■□□□ 1.14
RPUSD3-201ENST00000383820 MKI67P46013 3256 aaKnown RBP22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 SRGAP3O43295 1099 aa22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 FMNL1O95466 1100 aaPredicted RBP22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 OSBPP22059 807 aa22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 ZSCAN29Q8IWY8 852 aaPredicted RBP22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 XAGE2Q96GT9 111 aa22.14■■□□□ 1.13
RPUSD3-201ENST00000383820 MROH7-TTC4A0A0A0MT08 1334 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 A0A0G2JLL6 359 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 NPM3O75607 178 aaKnown RBP22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 BCRP11274 1271 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 PTPRAP18433 802 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 TFCP2Q12800 502 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 SH3BP5LQ7L8J4 393 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 PRRT2Q7Z6L0 340 aaPredicted RBP22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 SLC45A1Q9Y2W3 748 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 ZHX2Q9Y6X8 837 aa22.13■■□□□ 1.13
RPUSD3-201ENST00000383820 CTNND1O60716 968 aaKnown RBP22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 MAP4K4O95819 1239 aaPredicted RBP22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 MYCP01106 439 aaPredicted RBP22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 GRK4P32298 578 aa22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 BTDP43251 543 aa22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 ERICH6Q7L0X2 663 aa22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 RAET1EQ8TD07 263 aa22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 AFG3L2Q9Y4W6 797 aa22.12■■□□□ 1.13
RPUSD3-201ENST00000383820 DOCK1Q14185 1865 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 MYPNQ86TC9 1320 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 GPR75-ASB3A0A0A6YYF3 556 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 DDTLA6NHG4 134 aaPredicted RBP22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 IPO8O15397 1037 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 FCGRTP55899 365 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 NKX2-3Q8TAU0 364 aa22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 DDX4Q9NQI0 724 aaKnown RBP22.11■■□□□ 1.13
RPUSD3-201ENST00000383820 TBC1D12O60347 775 aa22.1■■□□□ 1.13
RPUSD3-201ENST00000383820 CYP2C8P10632 490 aa22.1■■□□□ 1.13
RPUSD3-201ENST00000383820 MECOMQ03112 1051 aa22.1■■□□□ 1.13
RPUSD3-201ENST00000383820 BRCA2P51587 3418 aa22.1■■□□□ 1.13
RPUSD3-201ENST00000383820 MGAMO43451 1857 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 ECM2O94769 699 aaPredicted RBP22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 LDHCP07864 332 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 RHBDL3P58872 404 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 GSTO1P78417 241 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 PICALMQ13492 652 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 MTFR1Q15390 333 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 PTPRFP10586 1907 aa22.09■■□□□ 1.13
RPUSD3-201ENST00000383820 PHIPQ8WWQ0 1821 aa22.08■■□□□ 1.13
RPUSD3-201ENST00000383820 GADL1Q6ZQY3 521 aa22.08■■□□□ 1.13
RPUSD3-201ENST00000383820 SPATA5Q8NB90 893 aa22.08■■□□□ 1.13
RPUSD3-201ENST00000383820 NEUROD6Q96NK8 337 aa22.08■■□□□ 1.13
RPUSD3-201ENST00000383820 HMG20BQ9P0W2 317 aa22.08■■□□□ 1.13
RPUSD3-201ENST00000383820 COL2A1P02458 1487 aaPredicted RBP22.08■■□□□ 1.12
RPUSD3-201ENST00000383820 GNAI2P04899 355 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 GJB1P08034 283 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 ARID4AP29374 1257 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 UBXN2AP68543 259 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 GORABQ5T7V8 394 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 SLAIN1Q8ND83 568 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 ZNF384Q8TF68 577 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 SHISA4Q96DD7 197 aa22.07■■□□□ 1.12
RPUSD3-201ENST00000383820 TRIM27P14373 513 aa22.06■■□□□ 1.12
RPUSD3-201ENST00000383820 GJA8P48165 433 aa22.06■■□□□ 1.12
RPUSD3-201ENST00000383820 PRKCZQ05513 592 aa22.06■■□□□ 1.12
RPUSD3-201ENST00000383820 NSUN4Q96CB9 384 aaKnown RBP22.06■■□□□ 1.12
RPUSD3-201ENST00000383820 CCL5P13501 91 aa22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 G3BP1Q13283 466 aaKnown RBP eCLIP22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 ATF7IPQ6VMQ6 1270 aa22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 TBC1D2Q9BYX2 928 aa22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 OSBPL5Q9H0X9 879 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 BIN2Q9UBW5 565 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 AGTPBP1Q9UPW5 1226 aa22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-201ENST00000383820 TRIM75PA6NK02 468 aa22.04■■□□□ 1.12
RPUSD3-201ENST00000383820 UQCRFS1P1P0C7P4 283 aa22.04■■□□□ 1.12
RPUSD3-201ENST00000383820 SMCR8Q8TEV9 937 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-201ENST00000383820 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.04■■□□□ 1.12
RPUSD3-201ENST00000383820 SLURP2P0DP57 97 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 CAPN2P17655 700 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 PI16Q6UXB8 463 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 PROCA1Q8NCQ7 364 aaPredicted RBP22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 PXYLP1Q8TE99 480 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 RNF208Q9H0X6 261 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 PNMA3Q9UL41 463 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 GABRQQ9UN88 632 aa22.03■■□□□ 1.12
RPUSD3-201ENST00000383820 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 H0YGN5 161 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 FXR1P51114 621 aaKnown RBP eCLIP22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 IRF5Q13568 498 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 TBC1D9Q6ZT07 1266 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 UBE2Q1Q7Z7E8 422 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 RAI14Q9P0K7 980 aa22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 COLQQ9Y215 455 aaPredicted RBP22.02■■□□□ 1.12
RPUSD3-201ENST00000383820 TNPO2O14787 897 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-201ENST00000383820 ADCY3O60266 1144 aa22.01■■□□□ 1.11
RPUSD3-201ENST00000383820 MCAMP43121 646 aa22.01■■□□□ 1.11
RPUSD3-201ENST00000383820 FLT3LGP49771 235 aa22.01■■□□□ 1.11
RPUSD3-201ENST00000383820 FRAT1Q92837 279 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms