RNA–Protein interactions for RNA: ENST00000382393.2

CBWD1-206, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-206ENST00000382393 ZSWIM5Q9P217 1185 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 IGSF3O75054 1194 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
CBWD1-206ENST00000382393 PRDM1O75626 825 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 SCRN1Q12765 414 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
CBWD1-206ENST00000382393 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
CBWD1-206ENST00000382393 CNNM2Q9H8M5 875 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
CBWD1-206ENST00000382393 LAMA4Q16363 1823 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 CHD4Q14839 1912 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
CBWD1-206ENST00000382393 PFKFB2O60825 505 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
CBWD1-206ENST00000382393 TMEM67Q5HYA8 995 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 LARGE2Q8N3Y3 721 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
CBWD1-206ENST00000382393 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
CBWD1-206ENST00000382393 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
CBWD1-206ENST00000382393 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
CBWD1-206ENST00000382393 RANBP6O60518 1105 aaKnown RBP12.72□□□□□ -0.37
CBWD1-206ENST00000382393 JAK2O60674 1132 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 PPFIA3O75145 1194 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
CBWD1-206ENST00000382393 DACT2Q5SW24 774 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 SUGT1Q9Y2Z0 365 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 GAKO14976 1311 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
CBWD1-206ENST00000382393 PLCG2P16885 1265 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
CBWD1-206ENST00000382393 RHBDL3P58872 404 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
CBWD1-206ENST00000382393 PSMD1Q99460 953 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
CBWD1-206ENST00000382393 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.37
CBWD1-206ENST00000382393 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 RAD17O75943 681 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.38
CBWD1-206ENST00000382393 MCM4P33991 863 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 PTGER2P43116 358 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 CRKP46108 304 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 FOSBP53539 338 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 PICALMQ13492 652 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-206ENST00000382393 SBK1Q52WX2 424 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-206ENST00000382393 FBXL16Q8N461 479 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 TEKT1Q969V4 418 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 TMEM87BQ96K49 555 aa12.71□□□□□ -0.38
CBWD1-206ENST00000382393 MKRN1Q9UHC7 482 aaKnown RBP12.71□□□□□ -0.38
CBWD1-206ENST00000382393 ANGEL1Q9UNK9 670 aaKnown RBP12.71□□□□□ -0.38
CBWD1-206ENST00000382393 BRD1O95696 1058 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 RXRAP19793 462 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 SYT1P21579 422 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 ESR2Q92731 530 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 MYL10Q9BUA6 226 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 LY9Q9HBG7 655 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
CBWD1-206ENST00000382393 MYH2Q9UKX2 1941 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 ERICH2A1L162 156 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 STX6O43752 255 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 PLCD1P51178 756 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 WTAPQ15007 396 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 LARP1BQ659C4 914 aaKnown RBP12.69□□□□□ -0.38
CBWD1-206ENST00000382393 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 POTEHQ6S545 545 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 UBAC1Q9BSL1 405 aa12.69□□□□□ -0.38
CBWD1-206ENST00000382393 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms