RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 BRWD3Q6RI45 1802 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 CCP110O43303 1012 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 H2AFXP16104 143 aaPredicted RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 EXOSC10Q01780 885 aaKnown RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 ELF2Q15723 593 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 CCAR1Q8IX12 1150 aaKnown RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 CELF1Q92879 486 aaKnown RBP10.34□□□□□ -0.75
GPNMB-202ENST00000381990 TIGD1Q96MW7 591 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 ZNF804BA4D1E1 1349 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 CARMIL3Q8ND23 1372 aa10.34□□□□□ -0.75
GPNMB-202ENST00000381990 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 DTNBO60941 627 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 FGD1P98174 961 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 STK3Q13188 491 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 SNW1Q13573 536 aaKnown RBP10.33□□□□□ -0.76
GPNMB-202ENST00000381990 FILIP1Q7Z7B0 1213 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 AGXT2Q9BYV1 514 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 GNL3LQ9NVN8 582 aaKnown RBP10.33□□□□□ -0.76
GPNMB-202ENST00000381990 UBR3Q6ZT12 1888 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 ADD1P35611 737 aaKnown RBP10.33□□□□□ -0.76
GPNMB-202ENST00000381990 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
GPNMB-202ENST00000381990 JAK2O60674 1132 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
GPNMB-202ENST00000381990 ZNF213O14771 459 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 NPHP1O15259 732 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 PFKFB2O60825 505 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 NFIXQ14938 502 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 ANKRD2Q9GZV1 360 aa10.32□□□□□ -0.76
GPNMB-202ENST00000381990 ARGLU1Q9NWB6 273 aaPredicted RBP10.32□□□□□ -0.76
GPNMB-202ENST00000381990 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 HAND2P61296 217 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TPM4P67936 248 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 ALX1Q15699 326 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 CCDC93Q567U6 631 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 LRRC2Q9BYS8 371 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TRMT1Q9NXH9 659 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 A0A1W2PQ27 194 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 A0A1W2PQ64 194 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 A0A1W2PQD8 194 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TRIM37O94972 964 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 ZMYM6O95789 1325 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TM4SF1P30408 202 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 GYG1P46976 350 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 ZRSR1Q15695 479 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TPM1P09493 284 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 SFPQP23246 707 aaKnown RBP eCLIP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 SCRN1Q12765 414 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 CNBD1Q8NA66 436 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 PPP1R13BQ96KQ4 1090 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 NOL10Q9BSC4 688 aaKnown RBP10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
GPNMB-202ENST00000381990 TNRC6CQ9HCJ0 1690 aaKnown RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 PHLPP2Q6ZVD8 1323 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 ATP8B1O43520 1251 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 APPP05067 770 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 RALYLQ86SE5 291 aaKnown RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 VPS37DQ86XT2 251 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 MB21D2Q8IYB1 491 aaPredicted RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 NCOA7Q8NI08 942 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 MRPS27Q92552 414 aaKnown RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 FAM84BQ96KN1 310 aaPredicted RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 ZNF446Q9NWS9 450 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 SEMA3EO15041 775 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 MBD4O95243 580 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 CYP2C19P33261 490 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 ME1P48163 572 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 APOBRQ0VD83 1088 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 ADALQ6DHV7 355 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 DDX11Q96FC9 970 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 ZNF274Q96GC6 653 aaPredicted RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 TMEM51Q9NW97 253 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 DENND2AQ9ULE3 1009 aa10.3□□□□□ -0.76
GPNMB-202ENST00000381990 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
GPNMB-202ENST00000381990 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 WTIPA6NIX2 430 aaPredicted RBP10.29□□□□□ -0.76
GPNMB-202ENST00000381990 GYS1P13807 737 aa10.29□□□□□ -0.76
GPNMB-202ENST00000381990 GNAT2P19087 354 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms