RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 UBASH3AP57075 661 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 TBC1D10BQ4KMP7 808 aaPredicted RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 SPATS2Q86XZ4 545 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 XPOTO43592 962 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 KRT9P35527 623 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 CKAP4Q07065 602 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 MCTP2Q6DN12 878 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 B4GALNT4Q76KP1 1039 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SNRKQ9NRH2 765 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 IFNKQ9P0W0 207 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 PPP1R9AQ9ULJ8 1098 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SPHKAPQ2M3C7 1700 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 ERLIN2O94905 339 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 RNASE9P60153 205 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 AIMP1Q12904 312 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 WASHC4Q2M389 1173 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 CCDC152Q4G0S7 254 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SNX32Q86XE0 403 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 TSPYL6Q8N831 410 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 TTC8Q8TAM2 541 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 UCMAQ8WVF2 138 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SEPT8Q92599 483 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 ECHDC1Q9NTX5 307 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 STAP2Q9UGK3 403 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 ODF2LQ9ULJ1 636 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 A0A087WUV0 522 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 SP100P23497 879 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 SIRT2Q8IXJ6 389 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 GSDMBQ8TAX9 411 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 IQCDQ96DY2 449 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 RABL2BQ9UNT1 228 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CTAGE9A4FU28 777 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 GOLGA6L10A6NI86 522 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 SORBS3O60504 671 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 DDX58O95786 925 aaKnown RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 TXLNAP40222 546 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 SAFBQ15424 915 aaKnown RBP eCLIP6.43□□□□□ -1.38
RFC1-202ENST00000381897 PDCD2Q16342 344 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 TMEM259Q4ZIN3 620 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CCDC50Q8IVM0 306 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CHAMP1Q96JM3 812 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CDK19Q9BWU1 502 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 NRBP1Q9UHY1 535 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CEP152O94986 1710 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 A0A1W2PP64 1363 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CCDC151A5D8V7 595 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 TULP2O00295 520 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 OPA1O60313 960 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 TMEM127O75204 238 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 CD53P19397 219 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 NAA30Q147X3 362 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 LMBRD2Q68DH5 695 aaPredicted RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 MMS22LQ6ZRQ5 1243 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 SRLQ86TD4 932 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 ZBTB46Q86UZ6 589 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 LLPHQ9BRT6 129 aaKnown RBP6.43□□□□□ -1.38
RFC1-202ENST00000381897 PALD1Q9ULE6 856 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 KAT6BQ8WYB5 2073 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 B4DLN1 442 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 RHPN1Q8TCX5 695 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 PLCH2O75038 1416 aa6.43□□□□□ -1.38
RFC1-202ENST00000381897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.42□□□□□ -1.38
RFC1-202ENST00000381897 RASSF10A6NK89 507 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 ZEB2O60315 1214 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 CDKL5O76039 1030 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 MYL1P05976 194 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 ATN1P54259 1190 aaPredicted RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 C10orf62Q5T681 223 aaPredicted RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 SOGA3Q5TF21 947 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 RNF168Q8IYW5 571 aaPredicted RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 NECAB1Q8N987 351 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 PRAM1Q96QH2 718 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 UBA5Q9GZZ9 404 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 TMX1Q9H3N1 280 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 CABP1Q9NZU7 370 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 TTF2Q9UNY4 1162 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 USP32Q8NFA0 1604 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 MAP3K4Q9Y6R4 1608 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 CPSF1Q10570 1443 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 LSM1O15116 133 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 ARHGAP25P42331 645 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 AKAP17AQ02040 695 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 NKX1-1Q15270 411 aaPredicted RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 SF3B3Q15393 1217 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 MAP7D1Q3KQU3 841 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 KIAA1328Q86T90 577 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 TTC6Q86TZ1 520 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 PFDN2Q9UHV9 154 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 RBM8AQ9Y5S9 174 aaKnown RBP6.42□□□□□ -1.38
RFC1-202ENST00000381897 LMTK3Q96Q04 1460 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 MAGEB6P1A0A0J9YX57 407 aa6.42□□□□□ -1.38
RFC1-202ENST00000381897 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms