RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 USP5P45974 858 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 SDR42E1Q8WUS8 393 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 TEPSINQ96N21 525 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 PPP2R3BQ9Y5P8 575 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
PDGFB-202ENST00000381551 TRAF5O00463 557 aa18.56■□□□□ 0.56
PDGFB-202ENST00000381551 GNAT2P19087 354 aa18.56■□□□□ 0.56
PDGFB-202ENST00000381551 FSTL1Q12841 308 aa18.56■□□□□ 0.56
PDGFB-202ENST00000381551 SH3BP5LQ7L8J4 393 aa18.56■□□□□ 0.56
PDGFB-202ENST00000381551 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
PDGFB-202ENST00000381551 OSBPL5Q9H0X9 879 aaPredicted RBP18.56■□□□□ 0.56
PDGFB-202ENST00000381551 DCP1AQ9NPI6 582 aaPredicted RBP18.56■□□□□ 0.56
PDGFB-202ENST00000381551 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
PDGFB-202ENST00000381551 FLT1P17948 1338 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 GSG1L2A8MUP6 293 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 CDC45O75419 566 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 FMR1Q06787 632 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDGFB-202ENST00000381551 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 CDCA5Q96FF9 252 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 IL25Q9H293 177 aa18.55■□□□□ 0.56
PDGFB-202ENST00000381551 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
PDGFB-202ENST00000381551 DDTLA6NHG4 134 aaPredicted RBP18.54■□□□□ 0.56
PDGFB-202ENST00000381551 FOXP2O15409 715 aa18.54■□□□□ 0.56
PDGFB-202ENST00000381551 NBPF12Q5TAG4 269 aaPredicted RBP18.54■□□□□ 0.56
PDGFB-202ENST00000381551 GIMAP6Q6P9H5 292 aa18.54■□□□□ 0.56
PDGFB-202ENST00000381551 PASKQ96RG2 1323 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 SGSM2O43147 1006 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
PDGFB-202ENST00000381551 SUPT20HL1Q3ZLR7 823 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 VPS53Q5VIR6 699 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 CDK5RAP2Q96SN8 1893 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 DHX36Q9H2U1 1008 aaKnown RBP18.53■□□□□ 0.56
PDGFB-202ENST00000381551 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
PDGFB-202ENST00000381551 RPAP1Q9BWH6 1393 aaPredicted RBP18.53■□□□□ 0.56
PDGFB-202ENST00000381551 RAD50Q92878 1312 aa18.52■□□□□ 0.56
PDGFB-202ENST00000381551 APPP05067 770 aa18.52■□□□□ 0.56
PDGFB-202ENST00000381551 HSPD1P10809 573 aaKnown RBP18.52■□□□□ 0.56
PDGFB-202ENST00000381551 ZSCAN29Q8IWY8 852 aaPredicted RBP18.52■□□□□ 0.56
PDGFB-202ENST00000381551 ESYT1Q9BSJ8 1104 aa18.52■□□□□ 0.56
PDGFB-202ENST00000381551 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
PDGFB-202ENST00000381551 SAP30BPQ9UHR5 308 aaKnown RBP18.52■□□□□ 0.56
PDGFB-202ENST00000381551 ATRNL1Q5VV63 1379 aa18.52■□□□□ 0.55
PDGFB-202ENST00000381551 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 ALX1Q15699 326 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 CST9Q5W186 159 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 CSRNP1Q96S65 589 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
PDGFB-202ENST00000381551 PI4KBQ9UBF8 816 aa18.51■□□□□ 0.55
PDGFB-202ENST00000381551 USP17L12C9JPN9 530 aa18.5■□□□□ 0.55
PDGFB-202ENST00000381551 USP17L21D6R901 530 aa18.5■□□□□ 0.55
PDGFB-202ENST00000381551 MAP3K10Q02779 954 aa18.5■□□□□ 0.55
PDGFB-202ENST00000381551 CTR9Q6PD62 1173 aa18.5■□□□□ 0.55
PDGFB-202ENST00000381551 FOXP4Q8IVH2 680 aaPredicted RBP18.5■□□□□ 0.55
PDGFB-202ENST00000381551 COL2A1P02458 1487 aaPredicted RBP18.5■□□□□ 0.55
PDGFB-202ENST00000381551 FGAP02671 866 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 POLR3DP05423 398 aaPredicted RBP18.49■□□□□ 0.55
PDGFB-202ENST00000381551 PLCD1P51178 756 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 SBK1Q52WX2 424 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 TTC6Q86TZ1 520 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
PDGFB-202ENST00000381551 HOOK2Q96ED9 719 aa18.49■□□□□ 0.55
PDGFB-202ENST00000381551 TBC1D12O60347 775 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 CELF2O95319 508 aaKnown RBP18.48■□□□□ 0.55
PDGFB-202ENST00000381551 CYP2D6P10635 497 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 NF2P35240 595 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 TDO2P48775 406 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 ZNF408Q9H9D4 720 aa18.48■□□□□ 0.55
PDGFB-202ENST00000381551 CYP2D7A0A087X1C5 515 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 USP2O75604 605 aaPredicted RBP18.47■□□□□ 0.55
PDGFB-202ENST00000381551 HLA-DOAP06340 250 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 SLURP2P0DP57 97 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 PTH1RQ03431 593 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 EVX2Q03828 476 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 NAPBQ9H115 298 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 ARPP21Q9UBL0 812 aaPredicted RBP18.47■□□□□ 0.55
PDGFB-202ENST00000381551 MYH1P12882 1939 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 SSC5DA1L4H1 1573 aa18.47■□□□□ 0.55
PDGFB-202ENST00000381551 MINDY4BA8MYZ0 360 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 SMIM22K7EJ46 135 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 PPP1R12BO60237 982 aaPredicted RBP18.46■□□□□ 0.55
PDGFB-202ENST00000381551 DCAF15Q66K64 600 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
PDGFB-202ENST00000381551 EHD4Q9H223 541 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 SERPINB13Q9UIV8 391 aa18.46■□□□□ 0.55
PDGFB-202ENST00000381551 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms