RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NFIAQ12857 509 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 MIGA1Q8NAN2 632 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 SLC10A4Q96EP9 437 aa19.58■□□□□ 0.72
SNRPB-201ENST00000381342 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
SNRPB-201ENST00000381342 AATFQ9NY61 560 aaKnown RBP eCLIP19.58■□□□□ 0.726e-13■■■□□ 17.4
SNRPB-201ENST00000381342 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 TCRBV5S4A2TA0A5A2 114 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 RHBDL3P58872 404 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 CDAN1Q8IWY9 1227 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
SNRPB-201ENST00000381342 ZIC5Q96T25 663 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNRPB-201ENST00000381342 TMEM39BQ9GZU3 492 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.57■□□□□ 0.72
SNRPB-201ENST00000381342 TSKSQ9UJT2 592 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
SNRPB-201ENST00000381342 DDX60LQ5H9U9 1706 aaKnown RBP19.56■□□□□ 0.72
SNRPB-201ENST00000381342 UNCXA6NJT0 531 aa19.56■□□□□ 0.72
SNRPB-201ENST00000381342 ADD2P35612 726 aa19.56■□□□□ 0.72
SNRPB-201ENST00000381342 DYNLL1P63167 89 aaKnown RBP19.56■□□□□ 0.72
SNRPB-201ENST00000381342 NBPF12Q5TAG4 269 aaPredicted RBP19.56■□□□□ 0.72
SNRPB-201ENST00000381342 OSBPL3Q9H4L5 887 aa19.56■□□□□ 0.72
SNRPB-201ENST00000381342 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
SNRPB-201ENST00000381342 WDHD1O75717 1129 aaPredicted RBP19.55■□□□□ 0.72
SNRPB-201ENST00000381342 TCP10Q12799 353 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 FKBP1CQ5VVH2 108 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 ERICH6BQ5W0A0 696 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 TEX11Q8IYF3 940 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 HOOK2Q96ED9 719 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
SNRPB-201ENST00000381342 SAGE1Q9NXZ1 904 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 RPAP1Q9BWH6 1393 aaPredicted RBP19.55■□□□□ 0.72
SNRPB-201ENST00000381342 MYH1P12882 1939 aa19.55■□□□□ 0.72
SNRPB-201ENST00000381342 TRPA1O75762 1119 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 BAG3O95817 575 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 RGS3P49796 1198 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 PICALMQ13492 652 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 MAP3K11Q16584 847 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 LDLRAD1Q5T700 205 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 TMED8Q6PL24 325 aaPredicted RBP19.54■□□□□ 0.72
SNRPB-201ENST00000381342 FAM83AQ86UY5 434 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
SNRPB-201ENST00000381342 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 PCNTO95613 3336 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 PPP4CP60510 307 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 MKRN3Q13064 507 aaKnown RBP19.53■□□□□ 0.72
SNRPB-201ENST00000381342 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 ANKRD13AQ8IZ07 590 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 IDI2Q9BXS1 227 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 RNF186Q9NXI6 227 aa19.53■□□□□ 0.72
SNRPB-201ENST00000381342 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 CAPN15O75808 1086 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 PLCG2P16885 1265 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 UBE3CQ15386 1083 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 ZFPM1Q8IX07 1006 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 FAM151AQ8WW52 585 aa19.52■□□□□ 0.72
SNRPB-201ENST00000381342 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
SNRPB-201ENST00000381342 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
SNRPB-201ENST00000381342 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
SNRPB-201ENST00000381342 EVI5LQ96CN4 794 aa19.51■□□□□ 0.71
SNRPB-201ENST00000381342 FZD1Q9UP38 647 aa19.51■□□□□ 0.71
SNRPB-201ENST00000381342 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
SNRPB-201ENST00000381342 COL2A1P02458 1487 aaPredicted RBP19.5■□□□□ 0.71
SNRPB-201ENST00000381342 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
SNRPB-201ENST00000381342 ENTPD3O75355 529 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 USP2O75604 605 aaPredicted RBP19.5■□□□□ 0.71
SNRPB-201ENST00000381342 MBD4O95243 580 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 INHBEP58166 350 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 SPRYD7Q5W111 196 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 TGFBRAP1Q8WUH2 860 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 RILPL2Q969X0 211 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 FLT1P17948 1338 aa19.5■□□□□ 0.71
SNRPB-201ENST00000381342 MANSC4A6NHS7 340 aaPredicted RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 ZFYP08048 801 aaPredicted RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 ZBTB48P10074 688 aaPredicted RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 GSPT1P15170 499 aaKnown RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 TM4SF4P48230 202 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 TTC22Q5TAA0 569 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 DCAF15Q66K64 600 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 SH3BP5LQ7L8J4 393 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 CERS3Q8IU89 383 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 APPBP2Q92624 585 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 PUS7LQ9H0K6 701 aaKnown RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 OSBPL5Q9H0X9 879 aaPredicted RBP19.49■□□□□ 0.71
SNRPB-201ENST00000381342 CSADQ9Y600 493 aa19.49■□□□□ 0.71
SNRPB-201ENST00000381342 LRRFIP1Q32MZ4 808 aaKnown RBP19.48■□□□□ 0.71
SNRPB-201ENST00000381342 ZSCAN29Q8IWY8 852 aaPredicted RBP19.48■□□□□ 0.71
SNRPB-201ENST00000381342 OSBP2Q969R2 916 aa19.48■□□□□ 0.71
SNRPB-201ENST00000381342 LAMB1P07942 1786 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 ATRNL1Q5VV63 1379 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 DDTLA6NHG4 134 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms