RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 GOLGA6AQ9NYA3 693 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 DDX41Q9UJV9 622 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PREX1Q8TCU6 1659 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 GNAT3A8MTJ3 354 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 B4DLN1 442 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 E7ENQ6 273 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 MRPL12P52815 198 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PEX19P40855 299 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 NNTQ13423 1086 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 ZSCAN26Q16670 478 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 ELOA2Q8IYF1 753 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PIK3C2BO00750 1634 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 ACTN2P35609 894 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 RAB15P59190 212 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PAK2Q13177 524 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 USP37Q86T82 979 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 TMTC2Q8N394 836 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 WDR70Q9NW82 654 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 TCHHQ07283 1943 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 IFIT5Q13325 482 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SNCBQ16143 134 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 EMBQ6PCB8 327 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 KIRREL3Q8IZU9 778 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 MICALL1Q8N3F8 863 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TERB1Q8NA31 727 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 NOC2LQ9Y3T9 749 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 NRKQ7Z2Y5 1582 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 ATP2A1O14983 1001 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 SEMA3EO15041 775 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CTIFO43310 598 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC6Q16204 474 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 C10orf76Q5T2E6 689 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TDRD7Q8NHU6 1098 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TSG101Q99816 390 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CLSTN2Q9H4D0 955 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 NRDE2Q9H7Z3 1164 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CTTNBP2NLQ9P2B4 639 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 SART1O43290 800 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TCP11L2Q8N4U5 519 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 MRPS27Q92552 414 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 OSBPL9Q96SU4 736 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 RNF41Q9H4P4 317 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 ANKARQ7Z5J8 1434 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 ATRXP46100 2492 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 IKBKBO14920 756 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 F13A1P00488 732 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 MAP2K1Q02750 393 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 BIRC3Q13489 604 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TERF2Q15554 542 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CHRNA2Q15822 529 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 SYCE1Q8N0S2 351 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 FAM96AQ9H5X1 160 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 FBXO31Q5XUX0 539 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 LARP1Q6PKG0 1096 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 IFNL2Q8IZJ0 200 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 KIAA1524Q8TCG1 905 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 MTRF1LQ9UGC7 380 aaKnown RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CHUKO15111 745 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 GSTA2P09210 222 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 ME1P48163 572 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 STXBP4Q6ZWJ1 553 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 GLT8D2Q9H1C3 349 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 TXLNGQ9NUQ3 528 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 MIS18AQ9NYP9 233 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 NDUFA13Q9P0J0 144 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 SLC26A4O43511 780 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 KIF4AO95239 1232 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 HSPA6P17066 643 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 FOXD4L6Q3SYB3 417 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 FOXD4L3Q6VB84 417 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-203ENST00000381196 PANK1Q8TE04 598 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 SPEF2Q9C093 1822 aa5.47□□□□□ -1.53
PTPRD-203ENST00000381196 CRYMQ14894 314 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 AACSQ86V21 672 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 AKAP12Q02952 1782 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 TYRO3Q06418 890 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 EYA3Q99504 573 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 DRC3Q9H069 523 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 MMRN2Q9H8L6 949 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 TUBA8Q9NY65 449 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-203ENST00000381196 RSPH14Q9UHP6 348 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 JRKLQ9Y4A0 524 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 NOS1P29475 1434 aa5.46□□□□□ -1.53
PTPRD-203ENST00000381196 GSTO1P78417 241 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 NFE2L2Q16236 605 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 MAIP1Q8WWC4 291 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SETDB2Q96T68 719 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 CDCA7Q9BWT1 371 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 MAP4K4O95819 1239 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-203ENST00000381196 PPP2R3AQ06190 1150 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 IQUBQ8NA54 791 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 SMARCC2Q8TAQ2 1214 aa5.46□□□□□ -1.54
PTPRD-203ENST00000381196 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms