RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PHKA1P46020 1223 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 GJA8P48165 433 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 SLC45A1Q9Y2W3 748 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 DOCK2Q92608 1830 aa19.85■□□□□ 0.77
VCX3A-201ENST00000381089 A0A0G2JLL6 359 aaPredicted RBP19.84■□□□□ 0.77
VCX3A-201ENST00000381089 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
VCX3A-201ENST00000381089 PTPRAP18433 802 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 PRKCZQ05513 592 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 CCDC102BQ68D86 513 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 GPAT2Q6NUI2 795 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 GADL1Q6ZQY3 521 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 PRRT2Q7Z6L0 340 aaPredicted RBP19.84■□□□□ 0.77
VCX3A-201ENST00000381089 SHISA4Q96DD7 197 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
VCX3A-201ENST00000381089 ABCF2Q9UG63 623 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 MYH2Q9UKX2 1941 aa19.84■□□□□ 0.77
VCX3A-201ENST00000381089 GAKO14976 1311 aa19.83■□□□□ 0.77
VCX3A-201ENST00000381089 PDS5AQ29RF7 1337 aaKnown RBP19.83■□□□□ 0.77
VCX3A-201ENST00000381089 PHF20L1A8MW92 1017 aa19.83■□□□□ 0.77
VCX3A-201ENST00000381089 ZFPM1Q8IX07 1006 aa19.83■□□□□ 0.77
VCX3A-201ENST00000381089 SMCR8Q8TEV9 937 aaPredicted RBP19.83■□□□□ 0.77
VCX3A-201ENST00000381089 ATRNL1Q5VV63 1379 aa19.83■□□□□ 0.76
VCX3A-201ENST00000381089 CTNND1O60716 968 aaKnown RBP19.82■□□□□ 0.76
VCX3A-201ENST00000381089 CAPN2P17655 700 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 CHRDL2Q6WN34 429 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 COPRSQ9NQ92 184 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 AKAP2Q9Y2D5 859 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 AFG3L2Q9Y4W6 797 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 NR2E3Q9Y5X4 410 aa19.82■□□□□ 0.76
VCX3A-201ENST00000381089 PICALMQ13492 652 aa19.81■□□□□ 0.76
VCX3A-201ENST00000381089 FAM163AQ96GL9 167 aaPredicted RBP19.81■□□□□ 0.76
VCX3A-201ENST00000381089 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
VCX3A-201ENST00000381089 PA2G4Q9UQ80 394 aaKnown RBP19.81■□□□□ 0.76
VCX3A-201ENST00000381089 MGAMO43451 1857 aa19.81■□□□□ 0.76
VCX3A-201ENST00000381089 TRIOBPQ9H2D6 2365 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 TNPO2O14787 897 aaKnown RBP19.8■□□□□ 0.76
VCX3A-201ENST00000381089 ADCY3O60266 1144 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 ADORA1P30542 326 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 BTDP43251 543 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 MAP3K10Q02779 954 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 MVPQ14764 893 aaKnown RBP19.8■□□□□ 0.76
VCX3A-201ENST00000381089 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 U2AF1L4Q8WU68 220 aaKnown RBP19.8■□□□□ 0.76
VCX3A-201ENST00000381089 PNMA3Q9UL41 463 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 RFX7Q2KHR2 1363 aa19.8■□□□□ 0.76
VCX3A-201ENST00000381089 MROH7-TTC4A0A0A0MT08 1334 aa19.79■□□□□ 0.76
VCX3A-201ENST00000381089 TRIM75PA6NK02 468 aa19.79■□□□□ 0.76
VCX3A-201ENST00000381089 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
VCX3A-201ENST00000381089 GABRQQ9UN88 632 aa19.79■□□□□ 0.76
VCX3A-201ENST00000381089 DOCK1Q14185 1865 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 A0A1B0GUL7 405 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 DDTLA6NHG4 134 aaPredicted RBP19.78■□□□□ 0.76
VCX3A-201ENST00000381089 FLT3LGP49771 235 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 TIMM10P62072 90 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 GSTO1P78417 241 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 SH3BP5LQ7L8J4 393 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 PXYLP1Q8TE99 480 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 COA7Q96BR5 231 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 AGTPBP1Q9UPW5 1226 aa19.78■□□□□ 0.76
VCX3A-201ENST00000381089 TBC1D12O60347 775 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 SGPL1O95470 568 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
VCX3A-201ENST00000381089 LDHCP07864 332 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 GNAI3P08754 354 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 IRF5Q13568 498 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 UBE2Q1Q7Z7E8 422 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 CDCA7LQ96GN5 454 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 XAGE2Q96GT9 111 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 TBC1D2Q9BYX2 928 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
VCX3A-201ENST00000381089 DDX4Q9NQI0 724 aaKnown RBP19.77■□□□□ 0.76
VCX3A-201ENST00000381089 GPR75-ASB3A0A0A6YYF3 556 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 SRGAP3O43295 1099 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
VCX3A-201ENST00000381089 INHAP05111 366 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 MECOMQ03112 1051 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
VCX3A-201ENST00000381089 GORABQ5T7V8 394 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 MEIS3Q99687 375 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.76■□□□□ 0.75
VCX3A-201ENST00000381089 TAOK2Q9UL54 1235 aa19.76■□□□□ 0.75
VCX3A-201ENST00000381089 PTPRFP10586 1907 aa19.75■□□□□ 0.75
VCX3A-201ENST00000381089 TFRCP02786 760 aaKnown RBP19.75■□□□□ 0.75
VCX3A-201ENST00000381089 ANKRD13CQ8N6S4 541 aa19.75■□□□□ 0.75
VCX3A-201ENST00000381089 PROCA1Q8NCQ7 364 aaPredicted RBP19.75■□□□□ 0.75
VCX3A-201ENST00000381089 NEUROD6Q96NK8 337 aa19.75■□□□□ 0.75
VCX3A-201ENST00000381089 OSBPL5Q9H0X9 879 aaPredicted RBP19.75■□□□□ 0.75
VCX3A-201ENST00000381089 RBM27Q9P2N5 1060 aaKnown RBP19.75■□□□□ 0.75
VCX3A-201ENST00000381089 ELNP15502 786 aa19.74■□□□□ 0.75
VCX3A-201ENST00000381089 TFCP2Q12800 502 aa19.74■□□□□ 0.75
VCX3A-201ENST00000381089 FAM110CQ1W6H9 321 aa19.74■□□□□ 0.75
VCX3A-201ENST00000381089 TRMT2AQ8IZ69 625 aaKnown RBP19.74■□□□□ 0.75
VCX3A-201ENST00000381089 EVI5O60447 810 aa19.73■□□□□ 0.75
VCX3A-201ENST00000381089 GCLCP48506 637 aaPredicted RBP19.73■□□□□ 0.75
VCX3A-201ENST00000381089 ARHGAP45Q92619 1136 aa19.73■□□□□ 0.75
VCX3A-201ENST00000381089 DEFB118Q96PH6 123 aa19.73■□□□□ 0.75
VCX3A-201ENST00000381089 NOL10Q9BSC4 688 aaKnown RBP19.73■□□□□ 0.75
VCX3A-201ENST00000381089 PHIPQ8WWQ0 1821 aa19.73■□□□□ 0.75
VCX3A-201ENST00000381089 RHBDL3P58872 404 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms