RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 NBPF15Q8N660 670 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 PPLO60437 1756 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.18
GABPB1-203ENST00000380877 ASIC1P78348 528 aa13.96□□□□□ -0.18
GABPB1-203ENST00000380877 PKP1Q13835 747 aa13.96□□□□□ -0.18
GABPB1-203ENST00000380877 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.18
GABPB1-203ENST00000380877 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.18
GABPB1-203ENST00000380877 KRT79Q5XKE5 535 aa13.96□□□□□ -0.18
GABPB1-203ENST00000380877 IQUBQ8NA54 791 aa13.96□□□□□ -0.18
GABPB1-203ENST00000380877 VWA3AA6NCI4 1184 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 PFKFB2O60825 505 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 YEATS4O95619 227 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 SERPINB2P05120 415 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-203ENST00000380877 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 FAM114A1Q8IWE2 563 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 ELP1O95163 1332 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
GABPB1-203ENST00000380877 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
GABPB1-203ENST00000380877 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
GABPB1-203ENST00000380877 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-203ENST00000380877 C16orf45Q96MC5 204 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-203ENST00000380877 PSMA7O14818 248 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 GADD45BO75293 160 aaPredicted RBP13.94□□□□□ -0.18
GABPB1-203ENST00000380877 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
GABPB1-203ENST00000380877 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 XDHP47989 1333 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
GABPB1-203ENST00000380877 TCP10Q12799 353 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 hCG_1642624A0A1W2PR95 340 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 SPAG1Q07617 926 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 PPP4R3AQ6IN85 833 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 MTMR6Q9Y217 621 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 LEMD3Q9Y2U8 911 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
GABPB1-203ENST00000380877 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 OSBP2Q969R2 916 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
GABPB1-203ENST00000380877 SEMA3EO15041 775 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ADD2P35612 726 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ZNF772Q68DY9 489 aaPredicted RBP13.93□□□□□ -0.18
GABPB1-203ENST00000380877 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 KIF5CO60282 957 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 TNNT1P13805 278 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
GABPB1-203ENST00000380877 C2CD5Q86YS7 1000 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 TNKSO95271 1327 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 USP40Q9NVE5 1235 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 GJA3Q9Y6H8 435 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 LUZP1Q86V48 1076 aa13.93□□□□□ -0.18
GABPB1-203ENST00000380877 ATP10DQ9P241 1426 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 M0R2C6 588 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
GABPB1-203ENST00000380877 UBXN4Q92575 508 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 KCNH3Q9ULD8 1083 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 URI1O94763 535 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-203ENST00000380877 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
GABPB1-203ENST00000380877 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 VPS36Q86VN1 386 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 ZSCAN10Q96SZ4 725 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-203ENST00000380877 PLIN2Q99541 437 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
GABPB1-203ENST00000380877 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
GABPB1-203ENST00000380877 SLC1A4P43007 532 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 KIF4BQ2VIQ3 1234 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 CTAGE1Q96RT6 745 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 RBSNQ9H1K0 784 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 AFF2P51816 1311 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 KCNQ2O43526 872 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 BBOX1O75936 387 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 STX17P56962 302 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 TRIM28Q13263 835 aaKnown RBP13.91□□□□□ -0.18
GABPB1-203ENST00000380877 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 ZNF771Q7L3S4 317 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-203ENST00000380877 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 CUTAO60888 179 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 RXRBP28702 533 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 SCLT1Q96NL6 688 aa13.91□□□□□ -0.18
GABPB1-203ENST00000380877 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms