RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SELENOOQ9BVL4 669 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 CNGA1P29973 690 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 WTAPQ15007 396 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 UAP1Q16222 522 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC184Q52MB2 194 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC117Q8IWD4 279 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-202ENST00000380833 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
CLCN4-202ENST00000380833 DDB1Q16531 1140 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 FAM71BQ8TC56 605 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
CLCN4-202ENST00000380833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLCN4-202ENST00000380833 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 ABL1P00519 1130 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 UBASH3AP57075 661 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TAF11Q15544 211 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 GPR161Q8N6U8 529 aaKnown RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 MAN1A2O60476 641 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 AMPD3Q01432 767 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TBC1D32Q96NH3 1257 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 KCNK9Q9NPC2 374 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 GNPATO15228 680 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 KRT5P13647 590 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 IFRD2Q12894 506 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TEX11Q8IYF3 940 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TERF2Q15554 542 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 SEPT10Q9P0V9 454 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TACC3Q9Y6A5 838 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CFTRP13569 1480 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CLTAP09496 248 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 TADA2BQ86TJ2 420 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 BCAS4Q8TDM0 211 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 RMI1Q9H9A7 625 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
CLCN4-202ENST00000380833 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.01□□□□□ -0.49
CLCN4-202ENST00000380833 GOLGA8KD6RF30 607 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 TCP10Q12799 353 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 DRC3Q9H069 523 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 NKIRAS1Q9NYS0 192 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 WDR3Q9UNX4 943 aaKnown RBP eCLIP12□□□□□ -0.49
CLCN4-202ENST00000380833 TOPBP1Q92547 1522 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 MCM7P33993 719 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CYLC1P35663 651 aaPredicted RBP12□□□□□ -0.49
CLCN4-202ENST00000380833 FAM47CQ5HY64 1035 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 PHAXQ9H814 394 aaKnown RBP12□□□□□ -0.49
CLCN4-202ENST00000380833 ZNF711Q9Y462 761 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CCT5P48643 541 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 GSTO1P78417 241 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CAPRIN2Q6IMN6 1127 aaKnown RBP12□□□□□ -0.49
CLCN4-202ENST00000380833 TSC1Q92574 1164 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 SPAG5Q96R06 1193 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 MED4Q9NPJ6 270 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 PLCB1Q9NQ66 1216 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CAPZA3Q96KX2 299 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 SPDYE3A6NKU9 549 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 ASIC1P78348 528 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
CLCN4-202ENST00000380833 DCAF17Q5H9S7 520 aaPredicted RBP12□□□□□ -0.49
CLCN4-202ENST00000380833 ZNF804AQ7Z570 1209 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 IFT81Q8WYA0 676 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 CARD6Q9BX69 1037 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 IMPG2Q9BZV3 1241 aa12□□□□□ -0.49
CLCN4-202ENST00000380833 LRPPRCP42704 1394 aaKnown RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 FCHSD2O94868 740 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 ZNF569Q5MCW4 686 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 VPS52Q8N1B4 723 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 TRIML1Q8N9V2 468 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 KRT75O95678 551 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 PSMD6Q15008 389 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 UBLCP1Q8WVY7 318 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 SF3A3Q12874 501 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 G3BP2Q9UN86 482 aaKnown RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 ACTR5Q9H9F9 607 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 DONSONQ9NYP3 566 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
CLCN4-202ENST00000380833 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 ZBTB22O15209 634 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms