RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 OSBPL5Q9H0X9 879 aaPredicted RBP14.05□□□□□ -0.16
RFC3-201ENST00000380071 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
RFC3-201ENST00000380071 LIFRP42702 1097 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 PNOCQ13519 176 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
RFC3-201ENST00000380071 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
RFC3-201ENST00000380071 LCORLQ8N3X6 602 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 CCDC112Q8NEF3 446 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 MPHOSPH8Q99549 860 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 HSD3B7Q9H2F3 369 aa14.05□□□□□ -0.16
RFC3-201ENST00000380071 ATP1A3P13637 1013 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 CBX1P83916 185 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 SSRP1Q08945 709 aaKnown RBP14.04□□□□□ -0.16
RFC3-201ENST00000380071 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 ARMCX5Q6P1M9 558 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 CMTR1Q8N1G2 835 aaKnown RBP14.04□□□□□ -0.16
RFC3-201ENST00000380071 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 TIGD1Q96MW7 591 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 GSDMDP57764 484 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 TRIM29Q14134 588 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 FOXP4Q8IVH2 680 aaPredicted RBP14.04□□□□□ -0.16
RFC3-201ENST00000380071 IMPACTQ9P2X3 320 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 TUBE1Q9UJT0 475 aa14.04□□□□□ -0.16
RFC3-201ENST00000380071 A0A0G2JS52 829 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 BTBD18B2RXH4 712 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
RFC3-201ENST00000380071 RESP18Q5W5W9 173 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 INTS5Q6P9B9 1019 aaKnown RBP14.03□□□□□ -0.16
RFC3-201ENST00000380071 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 KCNJ14Q9UNX9 436 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
RFC3-201ENST00000380071 FANCCQ00597 558 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 JMYQ8N9B5 988 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.03□□□□□ -0.16
RFC3-201ENST00000380071 STRCQ7RTU9 1775 aa14.03□□□□□ -0.16
RFC3-201ENST00000380071 ECM29Q5VYK3 1845 aa14.02□□□□□ -0.16
RFC3-201ENST00000380071 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.16
RFC3-201ENST00000380071 TDO2P48775 406 aa14.02□□□□□ -0.16
RFC3-201ENST00000380071 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.16
RFC3-201ENST00000380071 METTL16Q86W50 562 aaKnown RBP14.02□□□□□ -0.16
RFC3-201ENST00000380071 FAM237AA0A1B0GTK4 181 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 SMIM22K7EJ46 135 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 FOXN1O15353 648 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 IFNAR1P17181 557 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 GRIN1Q05586 938 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 E4F1Q66K89 784 aaPredicted RBP14.02□□□□□ -0.17
RFC3-201ENST00000380071 DPF2Q92785 391 aa14.02□□□□□ -0.17
RFC3-201ENST00000380071 UTP14AQ9BVJ6 771 aaKnown RBP14.02□□□□□ -0.17
RFC3-201ENST00000380071 IQSEC3Q9UPP2 1182 aaPredicted RBP14.02□□□□□ -0.17
RFC3-201ENST00000380071 IKBKBO14920 756 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 TPM4P67936 248 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 PTPN21Q16825 1174 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 KRT23Q9C075 422 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 CNNM2Q9H8M5 875 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 KCNH3Q9ULD8 1083 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 WTIPA6NIX2 430 aaPredicted RBP14.01□□□□□ -0.17
RFC3-201ENST00000380071 CUTAO60888 179 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 MMP1P03956 469 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 ACSBG1Q96GR2 724 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 AK7Q96M32 723 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 KCND1Q9NSA2 647 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 PCDHA5Q9Y5H7 936 aa14.01□□□□□ -0.17
RFC3-201ENST00000380071 STK36Q9NRP7 1315 aa14□□□□□ -0.17
RFC3-201ENST00000380071 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
RFC3-201ENST00000380071 BMP6P22004 513 aa14□□□□□ -0.17
RFC3-201ENST00000380071 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
RFC3-201ENST00000380071 WTAPQ15007 396 aa14□□□□□ -0.17
RFC3-201ENST00000380071 SYCP1Q15431 976 aa14□□□□□ -0.17
RFC3-201ENST00000380071 ADGRA1Q86SQ6 560 aa14□□□□□ -0.17
RFC3-201ENST00000380071 DIS3L2Q8IYB7 885 aaKnown RBP14□□□□□ -0.17
RFC3-201ENST00000380071 CNNM3Q8NE01 707 aa14□□□□□ -0.17
RFC3-201ENST00000380071 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
RFC3-201ENST00000380071 LRP5O75197 1615 aa14□□□□□ -0.17
RFC3-201ENST00000380071 SFPQP23246 707 aaKnown RBP eCLIP14□□□□□ -0.17
RFC3-201ENST00000380071 ATP6V1AP38606 617 aa14□□□□□ -0.17
RFC3-201ENST00000380071 NR5A1Q13285 461 aa14□□□□□ -0.17
RFC3-201ENST00000380071 RTN1Q16799 776 aa14□□□□□ -0.17
RFC3-201ENST00000380071 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
RFC3-201ENST00000380071 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
RFC3-201ENST00000380071 NACAP1Q9BZK3 213 aa14□□□□□ -0.17
RFC3-201ENST00000380071 CHD4Q14839 1912 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 CAMTA2O94983 1202 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
RFC3-201ENST00000380071 UBASH3AP57075 661 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
RFC3-201ENST00000380071 CHRNDQ07001 517 aa13.99□□□□□ -0.17
RFC3-201ENST00000380071 PDE4BQ07343 736 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms