RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 PDZD4Q76G19 769 aaPredicted RBP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 IRX4P78413 519 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 MIS12Q9H081 205 aa12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTCHD1-201ENST00000379361 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 NUCKS1Q9H1E3 243 aaKnown RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 HDXQ7Z353 690 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 TRAF5O00463 557 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 KRT81Q14533 505 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 ARHGEF2Q92974 986 aaKnown RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 TEKT1Q969V4 418 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 F8W8V4 182 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 HNRNPCL2B2RXH8 293 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 GSTA1P08263 222 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 GSTA2P09210 222 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
PTCHD1-201ENST00000379361 MARCKSP29966 332 aaPredicted RBP12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 IFT81Q8WYA0 676 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 BCRP11274 1271 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 POMGNT1Q8WZA1 660 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 PPME1Q9Y570 386 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 NUCB1Q02818 461 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 ISM2Q6H9L7 571 aa12.46□□□□□ -0.41
PTCHD1-201ENST00000379361 NONOQ15233 471 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 SCYL1Q96KG9 808 aa12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 MAN1A1P33908 653 aa12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 MRPS27Q92552 414 aaKnown RBP12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 ANO3Q9BYT9 981 aa12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 CCDC124Q96CT7 223 aaKnown RBP12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.42
PTCHD1-201ENST00000379361 RNF8O76064 485 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 RASSF2P50749 326 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 TTC31Q49AM3 519 aaPredicted RBP12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 TTC1Q99614 292 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 MAST3O60307 1309 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 Q6ZUG5 572 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 PDE1CQ14123 709 aaPredicted RBP12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 ZEB2O60315 1214 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 IFT20Q8IY31 132 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 SKILP12757 684 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 RAD50Q92878 1312 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 DENND2CQ68D51 928 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
PTCHD1-201ENST00000379361 WDR7Q9Y4E6 1490 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 ZBED4O75132 1171 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 HEXIM1O94992 359 aaKnown RBP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 GOLGA8QA0A0J9YX86 632 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 GOLGA8OA6NCC3 632 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 GOLGA8NF8WBI6 632 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 CCNT1O60563 726 aaKnown RBP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 CAPN2P17655 700 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 PDCD2Q16342 344 aaPredicted RBP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 KIF1BO60333 1816 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 PPFIA3O75145 1194 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 KRT28Q7Z3Y7 464 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 ABL1P00519 1130 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 Q9H521 79 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 FOXO3O43524 673 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 DBN1Q16643 649 aa12.44□□□□□ -0.42
PTCHD1-201ENST00000379361 BACH2Q9BYV9 841 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms