RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
UPK1A-202ENST00000379013 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
UPK1A-202ENST00000379013 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
UPK1A-202ENST00000379013 ECM29Q5VYK3 1845 aa16.69■□□□□ 0.26
UPK1A-202ENST00000379013 CA12O43570 354 aa16.69■□□□□ 0.26
UPK1A-202ENST00000379013 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
UPK1A-202ENST00000379013 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
UPK1A-202ENST00000379013 MYO1BO43795 1136 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
UPK1A-202ENST00000379013 PRDX5P30044 214 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 TM4SF4P48230 202 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 NAA16Q6N069 864 aaPredicted RBP16.68■□□□□ 0.26
UPK1A-202ENST00000379013 ARMC9Q7Z3E5 817 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 RAD50Q92878 1312 aa16.68■□□□□ 0.26
UPK1A-202ENST00000379013 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
UPK1A-202ENST00000379013 NF2P35240 595 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 TEKT1Q969V4 418 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 ABHD8Q96I13 439 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
UPK1A-202ENST00000379013 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
UPK1A-202ENST00000379013 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 BAG3O95817 575 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 PLCG2P16885 1265 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 ADD2P35612 726 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 APPBP2Q92624 585 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 SLC10A4Q96EP9 437 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
UPK1A-202ENST00000379013 HTTP42858 3142 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 PDE6AP16499 860 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 MECOMQ03112 1051 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
UPK1A-202ENST00000379013 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
UPK1A-202ENST00000379013 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
UPK1A-202ENST00000379013 MCOLN1Q9GZU1 580 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 HELLSQ9NRZ9 838 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
UPK1A-202ENST00000379013 NFIAQ12857 509 aa16.64■□□□□ 0.25
UPK1A-202ENST00000379013 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
UPK1A-202ENST00000379013 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
UPK1A-202ENST00000379013 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
UPK1A-202ENST00000379013 MROH7-TTC4A0A0A0MT08 1334 aa16.64■□□□□ 0.25
UPK1A-202ENST00000379013 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
UPK1A-202ENST00000379013 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 GNAT2P19087 354 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 CYP7A1P22680 504 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 PTPN18Q99952 460 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
UPK1A-202ENST00000379013 CENPFP49454 3210 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPK1A-202ENST00000379013 REC8O95072 547 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 CHMLP26374 656 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 ZMYM1Q5SVZ6 1142 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
UPK1A-202ENST00000379013 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 DGKZQ13574 1117 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
UPK1A-202ENST00000379013 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-202ENST00000379013 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 GAKO14976 1311 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-202ENST00000379013 CDK5RAP2Q96SN8 1893 aa16.61■□□□□ 0.25
UPK1A-202ENST00000379013 TCRBV5S4A2TA0A5A2 114 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 IREB2P48200 963 aaKnown RBP16.6■□□□□ 0.25
UPK1A-202ENST00000379013 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 TCP10Q12799 353 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 TNFAIP1Q13829 316 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 VGLL4Q14135 290 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
UPK1A-202ENST00000379013 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
UPK1A-202ENST00000379013 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
UPK1A-202ENST00000379013 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
UPK1A-202ENST00000379013 CAP1Q01518 475 aa16.59■□□□□ 0.25
UPK1A-202ENST00000379013 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-202ENST00000379013 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms