RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 TTC30AQ86WT1 665 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 TTC14Q96N46 770 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
PCDHA9-201ENST00000378122 FAM13AO94988 1023 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 PPP1R7Q15435 360 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 CFAP58Q5T655 872 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 HPDP32754 393 aaPredicted RBP13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 SEC62Q99442 399 aaKnown RBP13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 FERMT1Q9BQL6 677 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 GNAQP50148 359 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 PPP2R5CQ13362 524 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 DAAM2Q86T65 1068 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 FANCCQ00597 558 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 RAPGEF1Q13905 1077 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 TTC30BQ8N4P2 665 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 GNAT2P19087 354 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
PCDHA9-201ENST00000378122 TNNC1P63316 161 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 KRT79Q5XKE5 535 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 C2CD5Q86YS7 1000 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 A0A1W2PP64 1363 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 SREK1Q8WXA9 508 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 SPC25Q9HBM1 224 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 OAS2P29728 719 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 RNASE9P60153 205 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 PPARDQ03181 441 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 NACA2Q9H009 215 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 RIMS2Q9UQ26 1411 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 MAEAQ7L5Y9 396 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 CALML3P27482 149 aa13.43□□□□□ -0.26
PCDHA9-201ENST00000378122 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 ZBTB7AO95365 584 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 CDC37L1Q7L3B6 337 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 JAKMIP2Q96AA8 810 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 NLRP12P59046 1061 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 ATL3Q6DD88 541 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 B4GALNT4Q76KP1 1039 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
PCDHA9-201ENST00000378122 B4E1Z4 1266 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 SMC6Q96SB8 1091 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 IQUBQ8NA54 791 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 TESK2Q96S53 571 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 CEP83Q9Y592 693 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 ABL1P00519 1130 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 GOLGA6CA6NDK9 693 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 VIMP08670 466 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 GOLGA6DP0CG33 693 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 MYCLP12524 364 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 GOLGA6AQ9NYA3 693 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 LACTBP83111 547 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 TMCO4Q5TGY1 634 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 CPXCR1Q8N123 301 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 TRIM6Q9C030 488 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 M0QZ92 97 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 PLCB3Q01970 1234 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 SETDB1Q15047 1291 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 LEO1Q8WVC0 666 aaPredicted RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 TSC1Q92574 1164 aa13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 MTRF1LQ9UGC7 380 aaKnown RBP13.41□□□□□ -0.26
PCDHA9-201ENST00000378122 INPP5BP32019 993 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 ATP11AP98196 1134 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 USP37Q86T82 979 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 KCNH3Q9ULD8 1083 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 TCOF1Q13428 1488 aaKnown RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 ATP2A1O14983 1001 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 MBD4O95243 580 aa13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
PCDHA9-201ENST00000378122 TUBBP07437 444 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms