RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 GPAA1O43292 621 aa25.14■■□□□ 1.62
HLA-C-201ENST00000376228 SPRYD3Q8NCJ5 442 aa25.14■■□□□ 1.62
HLA-C-201ENST00000376228 CWC22Q9HCG8 908 aaKnown RBP25.14■■□□□ 1.62
HLA-C-201ENST00000376228 LAMA4Q16363 1823 aa25.14■■□□□ 1.62
HLA-C-201ENST00000376228 CNTNAP1P78357 1384 aa25.13■■□□□ 1.61
HLA-C-201ENST00000376228 FOXP2O15409 715 aa25.13■■□□□ 1.61
HLA-C-201ENST00000376228 GRIK5Q16478 980 aa25.13■■□□□ 1.61
HLA-C-201ENST00000376228 INTS4Q96HW7 963 aaKnown RBP25.13■■□□□ 1.61
HLA-C-201ENST00000376228 ANP32EQ9BTT0 268 aa25.13■■□□□ 1.61
HLA-C-201ENST00000376228 TTF2Q9UNY4 1162 aaKnown RBP25.12■■□□□ 1.61
HLA-C-201ENST00000376228 DLGAP5Q15398 846 aa25.12■■□□□ 1.61
HLA-C-201ENST00000376228 BLOC1S2Q6QNY1 142 aa25.12■■□□□ 1.61
HLA-C-201ENST00000376228 PDRG1Q9NUG6 133 aa25.12■■□□□ 1.61
HLA-C-201ENST00000376228 ZMYM6O95789 1325 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 MMP14P50281 582 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 RBM5P52756 815 aaKnown RBP eCLIP25.11■■□□□ 1.61
HLA-C-201ENST00000376228 AK2P54819 239 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 ALX1Q15699 326 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 CFAP100Q494V2 611 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 MAGEB6Q8N7X4 407 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 ZBED3Q96IU2 234 aaPredicted RBP25.11■■□□□ 1.61
HLA-C-201ENST00000376228 LRP2BPQ9P2M1 347 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 LIMCH1Q9UPQ0 1083 aa25.11■■□□□ 1.61
HLA-C-201ENST00000376228 PITPNM2Q9BZ72 1349 aa25.1■■□□□ 1.61
HLA-C-201ENST00000376228 HMGB1P09429 215 aaKnown RBP25.1■■□□□ 1.61
HLA-C-201ENST00000376228 RPS6KB1P23443 525 aa25.1■■□□□ 1.61
HLA-C-201ENST00000376228 NEK1Q96PY6 1258 aa25.1■■□□□ 1.61
HLA-C-201ENST00000376228 STRBPQ96SI9 672 aaKnown RBP25.1■■□□□ 1.61
HLA-C-201ENST00000376228 MAST2Q6P0Q8 1798 aa25.1■■□□□ 1.61
HLA-C-201ENST00000376228 ANKRD1Q15327 319 aa25.09■■□□□ 1.61
HLA-C-201ENST00000376228 DEFB115Q30KQ5 88 aa25.09■■□□□ 1.61
HLA-C-201ENST00000376228 PRAMEF18Q5VWM3 479 aa25.09■■□□□ 1.61
HLA-C-201ENST00000376228 CDCA5Q96FF9 252 aa25.09■■□□□ 1.61
HLA-C-201ENST00000376228 ZSCAN31Q96LW9 406 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-201ENST00000376228 TAF6LQ9Y6J9 622 aa25.09■■□□□ 1.61
HLA-C-201ENST00000376228 SALL1Q9NSC2 1324 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 RASSF10A6NK89 507 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 FGAP02671 866 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 VEGFBP49765 207 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 PAXIP1Q6ZW49 1069 aaPredicted RBP25.08■■□□□ 1.61
HLA-C-201ENST00000376228 JMYQ8N9B5 988 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 AIDAQ96BJ3 306 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 TLL2Q9Y6L7 1015 aa25.08■■□□□ 1.61
HLA-C-201ENST00000376228 GNAT2P19087 354 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 TBC1D22AQ8WUA7 517 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 PRMT6Q96LA8 375 aaPredicted RBP25.07■■□□□ 1.6
HLA-C-201ENST00000376228 CLRN2A0PK11 232 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 SPDYE2BA6NHP3 402 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 SPDYE6P0CI01 402 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 GRM1Q13255 1194 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 IMMTQ16891 758 aaKnown RBP25.07■■□□□ 1.6
HLA-C-201ENST00000376228 SAPCD2Q86UD0 394 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 MTMR14Q8NCE2 650 aa25.07■■□□□ 1.6
HLA-C-201ENST00000376228 SH2B1Q9NRF2 756 aaPredicted RBP25.07■■□□□ 1.6
HLA-C-201ENST00000376228 CPA1P15085 419 aa25.06■■□□□ 1.6
HLA-C-201ENST00000376228 ZGPATQ8N5A5 531 aaKnown RBP25.06■■□□□ 1.6
HLA-C-201ENST00000376228 PATL2C9JE40 543 aaKnown RBP25.05■■□□□ 1.6
HLA-C-201ENST00000376228 STOX1Q6ZVD7 989 aa25.05■■□□□ 1.6
HLA-C-201ENST00000376228 WDR66Q8TBY9 1149 aa25.05■■□□□ 1.6
HLA-C-201ENST00000376228 ABCF2Q9UG63 623 aa25.05■■□□□ 1.6
HLA-C-201ENST00000376228 SERPINA10Q9UK55 444 aa25.05■■□□□ 1.6
HLA-C-201ENST00000376228 CRKP46108 304 aa25.04■■□□□ 1.6
HLA-C-201ENST00000376228 SPTY2D1Q68D10 685 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-201ENST00000376228 CYP4F22Q6NT55 531 aa25.04■■□□□ 1.6
HLA-C-201ENST00000376228 GBA2Q9HCG7 927 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-201ENST00000376228 RAI14Q9P0K7 980 aa25.04■■□□□ 1.6
HLA-C-201ENST00000376228 E7EWF7 191 aa25.03■■□□□ 1.6
HLA-C-201ENST00000376228 CYP7A1P22680 504 aa25.03■■□□□ 1.6
HLA-C-201ENST00000376228 RAB3GAP1Q15042 981 aa25.03■■□□□ 1.6
HLA-C-201ENST00000376228 NFKBIBQ15653 356 aa25.03■■□□□ 1.6
HLA-C-201ENST00000376228 APOBEC3FQ8IUX4 373 aaKnown RBP25.03■■□□□ 1.6
HLA-C-201ENST00000376228 VEZTQ9HBM0 779 aa25.03■■□□□ 1.6
HLA-C-201ENST00000376228 MYO1BO43795 1136 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 MBD4O95243 580 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 NUCB2P80303 420 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 DHX32Q7L7V1 743 aaKnown RBP25.02■■□□□ 1.6
HLA-C-201ENST00000376228 FBXL16Q8N461 479 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 HUNKP57058 714 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 EXOSC10Q01780 885 aaKnown RBP25.02■■□□□ 1.6
HLA-C-201ENST00000376228 NSUN4Q96CB9 384 aaKnown RBP25.02■■□□□ 1.6
HLA-C-201ENST00000376228 CAPNS2Q96L46 248 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 AGXT2Q9BYV1 514 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 TDRD3Q9H7E2 651 aaKnown RBP25.02■■□□□ 1.6
HLA-C-201ENST00000376228 FOXD4L1Q9NU39 408 aa25.02■■□□□ 1.6
HLA-C-201ENST00000376228 WDR33Q9C0J8 1336 aaKnown RBP25.01■■□□□ 1.59
HLA-C-201ENST00000376228 PAPPA2Q9BXP8 1791 aa25.01■■□□□ 1.59
HLA-C-201ENST00000376228 ZNF213O14771 459 aa25.01■■□□□ 1.59
HLA-C-201ENST00000376228 PRDX5P30044 214 aa25.01■■□□□ 1.59
HLA-C-201ENST00000376228 NAA16Q6N069 864 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-201ENST00000376228 C2orf69Q8N8R5 385 aa25.01■■□□□ 1.59
HLA-C-201ENST00000376228 COL9A3Q14050 684 aaPredicted RBP25■■□□□ 1.59
HLA-C-201ENST00000376228 TOB2Q14106 344 aaPredicted RBP25■■□□□ 1.59
HLA-C-201ENST00000376228 TEKT1Q969V4 418 aa25■■□□□ 1.59
HLA-C-201ENST00000376228 MYH2Q9UKX2 1941 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 GSG1L2A8MUP6 293 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 MOB2Q70IA6 237 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 NOL8Q76FK4 1167 aaKnown RBP24.99■■□□□ 1.59
HLA-C-201ENST00000376228 IFNL3Q8IZI9 196 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 ZNF384Q8TF68 577 aa24.99■■□□□ 1.59
HLA-C-201ENST00000376228 RIOK1Q9BRS2 568 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms