RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
MSH5-202ENST00000375740 SGMS1Q86VZ5 419 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 STK11IPQ8N1F8 1099 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 MYL10Q9BUA6 226 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 KRT23Q9C075 422 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
MSH5-202ENST00000375740 ZPR1O75312 459 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 LIFRP42702 1097 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 ANO6Q4KMQ2 910 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 NBPF5PQ86XG9 351 aaPredicted RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 FAM84BQ96KN1 310 aaPredicted RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 PCDHA7Q9UN72 937 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 CLIC4Q9Y696 253 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 BTAF1O14981 1849 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 CDKL5O76039 1030 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 RPS8P62241 208 aaKnown RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 PHKBQ93100 1093 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 TOMM22Q9NS69 142 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 FAM217BQ9NTX9 383 aaPredicted RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
MSH5-202ENST00000375740 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
MSH5-202ENST00000375740 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 KIF23Q02241 960 aaPredicted RBP16.21■□□□□ 0.19
MSH5-202ENST00000375740 NTRK3Q16288 839 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 ENGASEQ8NFI3 743 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 ZKSCAN3Q9BRR0 538 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 CBX8Q9HC52 389 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 SLC12A7Q9Y666 1083 aa16.21■□□□□ 0.19
MSH5-202ENST00000375740 COL1A1P02452 1464 aaPredicted RBP16.21■□□□□ 0.19
MSH5-202ENST00000375740 CCDC69A6NI79 296 aa16.21■□□□□ 0.18
MSH5-202ENST00000375740 FSIP1Q8NA03 581 aa16.21■□□□□ 0.18
MSH5-202ENST00000375740 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.18
MSH5-202ENST00000375740 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.18
MSH5-202ENST00000375740 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.18
MSH5-202ENST00000375740 STK38Q15208 465 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
MSH5-202ENST00000375740 MINDY4BA8MYZ0 360 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 KLRK1P26718 216 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
MSH5-202ENST00000375740 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 PPARAQ07869 468 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 CHAF1AQ13111 956 aaPredicted RBP16.2■□□□□ 0.18
MSH5-202ENST00000375740 ADALQ6DHV7 355 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 SYNE3Q6ZMZ3 975 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
MSH5-202ENST00000375740 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
MSH5-202ENST00000375740 SF3A1Q15459 793 aaKnown RBP16.19■□□□□ 0.18
MSH5-202ENST00000375740 KRT40Q6A162 431 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 POLR3EQ9NVU0 708 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 CTAGE5O15320 804 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 PTGS1P23219 599 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 DYNLL1P63167 89 aaKnown RBP16.19■□□□□ 0.18
MSH5-202ENST00000375740 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
MSH5-202ENST00000375740 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
MSH5-202ENST00000375740 DNAJC25Q9H1X3 360 aa16.19■□□□□ 0.18
MSH5-202ENST00000375740 YEATS4O95619 227 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 SLFN14P0C7P3 912 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 WTAPQ15007 396 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 FEZ1Q99689 392 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
MSH5-202ENST00000375740 SMIM22K7EJ46 135 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 SPTLC2O15270 562 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 KINO60870 393 aaKnown RBP16.18■□□□□ 0.18
MSH5-202ENST00000375740 LRMPQ12912 555 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 KCNG4Q8TDN1 519 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 ZNF384Q8TF68 577 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 MRPS27Q92552 414 aaKnown RBP16.18■□□□□ 0.18
MSH5-202ENST00000375740 RNF41Q9H4P4 317 aaPredicted RBP16.18■□□□□ 0.18
MSH5-202ENST00000375740 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
MSH5-202ENST00000375740 CACNA1SQ13698 1873 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 A0A1B0GVL5 298 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 A0A1W2PQ27 194 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 A0A1W2PQ64 194 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 A0A1W2PQD8 194 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 UBE2Q2LH0YL09 131 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 ZNF165P49910 485 aa16.17■□□□□ 0.18
MSH5-202ENST00000375740 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms