RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 TCP10Q12799 353 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 ALX1Q15699 326 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 EAPPQ56P03 285 aaPredicted RBP24.66■■□□□ 1.54
NELFE-202ENST00000375429 FKBP1CQ5VVH2 108 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 GIMAP6Q6P9H5 292 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 PNMA8AQ86V59 439 aaPredicted RBP24.66■■□□□ 1.54
NELFE-202ENST00000375429 USP26Q9BXU7 913 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 NACAP1Q9BZK3 213 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 GGA3Q9NZ52 723 aa24.66■■□□□ 1.54
NELFE-202ENST00000375429 NAV1Q8NEY1 1877 aa24.65■■□□□ 1.54
NELFE-202ENST00000375429 NPM3O75607 178 aaKnown RBP24.65■■□□□ 1.54
NELFE-202ENST00000375429 CNTNAP1P78357 1384 aa24.64■■□□□ 1.54
NELFE-202ENST00000375429 ENTPD3O75355 529 aa24.64■■□□□ 1.54
NELFE-202ENST00000375429 TDO2P48775 406 aa24.64■■□□□ 1.54
NELFE-202ENST00000375429 OSBPL5Q9H0X9 879 aaPredicted RBP24.64■■□□□ 1.54
NELFE-202ENST00000375429 NAPBQ9H115 298 aa24.64■■□□□ 1.54
NELFE-202ENST00000375429 MCM9Q9NXL9 1143 aa24.64■■□□□ 1.54
NELFE-202ENST00000375429 SAP30BPQ9UHR5 308 aaKnown RBP24.64■■□□□ 1.54
NELFE-202ENST00000375429 EIF5BO60841 1220 aaKnown RBP24.63■■□□□ 1.53
NELFE-202ENST00000375429 CTR9Q6PD62 1173 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 DDRGK1Q96HY6 314 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 PGAP2Q9UHJ9 254 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 RBM8AQ9Y5S9 174 aaKnown RBP24.63■■□□□ 1.53
NELFE-202ENST00000375429 USP17L12C9JPN9 530 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 USP17L21D6R901 530 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 POTEIP0CG38 1075 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 POTEJP0CG39 1038 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 FAM83AQ86UY5 434 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 ZC3H15Q8WU90 426 aaKnown RBP24.63■■□□□ 1.53
NELFE-202ENST00000375429 FAM151AQ8WW52 585 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 PALD1Q9ULE6 856 aa24.63■■□□□ 1.53
NELFE-202ENST00000375429 U3KPZ7 1027 aaPredicted RBP24.63■■□□□ 1.53
NELFE-202ENST00000375429 SH3BP5LQ7L8J4 393 aa24.62■■□□□ 1.53
NELFE-202ENST00000375429 APOBEC3FQ8IUX4 373 aaKnown RBP24.62■■□□□ 1.53
NELFE-202ENST00000375429 DDX60LQ5H9U9 1706 aaKnown RBP24.62■■□□□ 1.53
NELFE-202ENST00000375429 PITPNM2Q9BZ72 1349 aa24.62■■□□□ 1.53
NELFE-202ENST00000375429 CYP2D7A0A087X1C5 515 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 SMIM22K7EJ46 135 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 EPB41L2O43491 1005 aaKnown RBP24.61■■□□□ 1.53
NELFE-202ENST00000375429 CYP2D6P10635 497 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 EVX2Q03828 476 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 RASA3Q14644 834 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 NECTIN1Q15223 517 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 SLC4A8Q2Y0W8 1093 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 CTNNA3Q9UI47 895 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 ZMYM6O95789 1325 aa24.61■■□□□ 1.53
NELFE-202ENST00000375429 DDTLA6NHG4 134 aaPredicted RBP24.6■■□□□ 1.53
NELFE-202ENST00000375429 TNNI2P48788 182 aa24.6■■□□□ 1.53
NELFE-202ENST00000375429 TNFAIP1Q13829 316 aa24.6■■□□□ 1.53
NELFE-202ENST00000375429 SBK1Q52WX2 424 aa24.6■■□□□ 1.53
NELFE-202ENST00000375429 DCPSQ96C86 337 aaKnown RBP24.6■■□□□ 1.53
NELFE-202ENST00000375429 TMEM39BQ9GZU3 492 aa24.6■■□□□ 1.53
NELFE-202ENST00000375429 DEFB129Q9H1M3 183 aa24.6■■□□□ 1.53
NELFE-202ENST00000375429 MINDY4BA8MYZ0 360 aa24.59■■□□□ 1.53
NELFE-202ENST00000375429 POLR3DP05423 398 aaPredicted RBP24.59■■□□□ 1.53
NELFE-202ENST00000375429 GPBP1L1Q9HC44 474 aaPredicted RBP24.59■■□□□ 1.53
NELFE-202ENST00000375429 ARPP21Q9UBL0 812 aaPredicted RBP24.59■■□□□ 1.53
NELFE-202ENST00000375429 CLEC11AQ9Y240 323 aa24.59■■□□□ 1.53
NELFE-202ENST00000375429 PLCD1P51178 756 aa24.59■■□□□ 1.53
NELFE-202ENST00000375429 C12orf60Q5U649 245 aa24.59■■□□□ 1.53
NELFE-202ENST00000375429 ZSCAN29Q8IWY8 852 aaPredicted RBP24.59■■□□□ 1.53
NELFE-202ENST00000375429 HAND2P61296 217 aa24.58■■□□□ 1.52
NELFE-202ENST00000375429 CDAN1Q8IWY9 1227 aa24.58■■□□□ 1.52
NELFE-202ENST00000375429 ZNF213O14771 459 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 CYP21A2P08686 494 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 YY1P25490 414 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 HSPA4P34932 840 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 PPARAQ07869 468 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 CREB3L3Q68CJ9 461 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 TEPSINQ96N21 525 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 DHX36Q9H2U1 1008 aaKnown RBP24.57■■□□□ 1.52
NELFE-202ENST00000375429 ATRNL1Q5VV63 1379 aa24.57■■□□□ 1.52
NELFE-202ENST00000375429 LAMB1P07942 1786 aa24.56■■□□□ 1.52
NELFE-202ENST00000375429 COL2A1P02458 1487 aaPredicted RBP24.56■■□□□ 1.52
NELFE-202ENST00000375429 SLC27A2O14975 620 aa24.56■■□□□ 1.52
NELFE-202ENST00000375429 IMMTQ16891 758 aaKnown RBP24.56■■□□□ 1.52
NELFE-202ENST00000375429 TTC6Q86TZ1 520 aa24.56■■□□□ 1.52
NELFE-202ENST00000375429 SULF1Q8IWU6 871 aa24.56■■□□□ 1.52
NELFE-202ENST00000375429 LAMA4Q16363 1823 aa24.56■■□□□ 1.52
NELFE-202ENST00000375429 ADM5C9JUS6 153 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 CTDSPL2Q05D32 466 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 PRAMEF18Q5VWM3 479 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 DLK2Q6UY11 383 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 KRT26Q7Z3Y9 468 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 LDHDQ86WU2 507 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 AMOTL1Q8IY63 956 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 NBPF3Q9H094 633 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 ANAPC4Q9UJX5 808 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 TAF6LQ9Y6J9 622 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 SIPA1L1O43166 1804 aa24.55■■□□□ 1.52
NELFE-202ENST00000375429 USP48Q86UV5 1035 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 STK11IPQ8N1F8 1099 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 PI4KBQ9UBF8 816 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 SLURP2P0DP57 97 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 MAP1SQ66K74 1059 aaPredicted RBP24.54■■□□□ 1.52
NELFE-202ENST00000375429 RASEFQ8IZ41 740 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 KCNB2Q92953 911 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 CSRNP1Q96S65 589 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 PPP2R3BQ9Y5P8 575 aa24.54■■□□□ 1.52
NELFE-202ENST00000375429 TACC3Q9Y6A5 838 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms