RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 NUP62CLQ9H1M0 184 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 PARVAQ9NVD7 372 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 OGFRQ9NZT2 677 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 STOML2Q9UJZ1 356 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 IQANK1A0A1B0GTG1 560 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 CLTAP09496 248 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 HDAC4P56524 1084 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 RPS6KA2Q15349 733 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 PABPN1Q86U42 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 CABLES1Q8TDN4 633 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 SAAL1Q96ER3 474 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 NDE1Q9NXR1 346 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 BAG3O95817 575 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 SF3B3Q15393 1217 aaKnown RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 UAP1Q16222 522 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 LRRC8BQ6P9F7 803 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 STRN4Q9NRL3 753 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ZNF229Q9UJW7 825 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 POLE2P56282 527 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 OLR1P78380 273 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 FAM71BQ8TC56 605 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 HAUS2Q9NVX0 235 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 CDKL5O76039 1030 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ATF4P18848 351 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ANKRD20A3Q5VUR7 823 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 TRIM69Q86WT6 500 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 MNTQ99583 582 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ZSCAN16Q9H4T2 348 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 HOMER3Q9NSC5 361 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 MCF2P10911 925 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 EEF2P13639 858 aaKnown RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 PUDPQ08623 228 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 TRAF1Q13077 416 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 NBPF9Q3BBW0 867 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 RNF207Q6ZRF8 634 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ARMC2Q8NEN0 867 aa6.62□□□□□ -1.35
SCN2A-202ENST00000375427 MRPL40Q9NQ50 206 aaKnown RBP6.62□□□□□ -1.35
SCN2A-202ENST00000375427 ECEL1O95672 775 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 SESN2P58004 480 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 STX19Q8N4C7 294 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 KNL1Q8NG31 2342 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 IDH3BO43837 385 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 SLC9A1P19634 815 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 NME8Q8N427 588 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 DACH2Q96NX9 599 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 GSDMAQ96QA5 445 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 KIF17Q9P2E2 1029 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 KRT87PA6NCN2 255 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 POLR2DO15514 142 aaKnown RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 GNL1P36915 607 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 AMPHP49418 695 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 KIF11P52732 1056 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 KRT71Q3SY84 523 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 CEP55Q53EZ4 464 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TP53INP1Q96A56 240 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TFIP11Q9UBB9 837 aaKnown RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 LCA5LO95447 670 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC85BQ15834 202 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 PARP10Q53GL7 1025 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 PPP4R1Q8TF05 950 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 ZNF830Q96NB3 372 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 C22orf23Q9BZE7 217 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 FAM129AQ9BZQ8 928 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 SNX1Q13596 522 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TBC1D5Q92609 795 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 ACTR5Q9H9F9 607 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 SAMSN1Q9NSI8 373 aaKnown RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TRPC5Q9UL62 973 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 HYOU1Q9Y4L1 999 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 LIG3P49916 1009 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 PPP2R5DQ14738 602 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 TEX2Q8IWB9 1127 aa6.61□□□□□ -1.35
SCN2A-202ENST00000375427 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 GPR101Q96P66 508 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-202ENST00000375427 HSD3B2P26439 372 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 YWHAEP62258 255 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 WTAPQ15007 396 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 ELMSAN1Q6PJG2 1045 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SSTP61278 116 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 KARSQ15046 597 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 TRMT10CQ7L0Y3 403 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SH3BP5LQ7L8J4 393 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SYMPKQ92797 1274 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 GCC1Q96CN9 775 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 FKBP14Q9NWM8 211 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SPAG17Q6Q759 2223 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 GUCY1B2O75343 617 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 KRT13P13646 458 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 ITIH3Q06033 890 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 RAB3GAP1Q15042 981 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 SLC44A4Q53GD3 710 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
SCN2A-202ENST00000375427 RNASE11Q8TAA1 199 aaKnown RBP6.6□□□□□ -1.35
SCN2A-202ENST00000375427 CCDC12Q8WUD4 166 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms