RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 NLRP3Q96P20 1036 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 VPS16Q9H269 839 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 MTUS1Q9ULD2 1270 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 NDUFAB1O14561 156 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 GPAA1O43292 621 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 PKP1Q13835 747 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 SELENOSQ9BQE4 189 aa23.78■■□□□ 1.4
TGFBR1-202ENST00000374994 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 GBP6Q6ZN66 633 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 FCHSD1Q86WN1 690 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 ARHGAP25P42331 645 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 KRT9P35527 623 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 CEP57Q86XR8 500 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 LRRC8AQ8IWT6 810 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 IQCGQ9H095 443 aaKnown RBP23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 WWC3Q9ULE0 1092 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 CALCOCO2Q13137 446 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 CCDC65Q8IXS2 484 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
TGFBR1-202ENST00000374994 RBM6P78332 1123 aaKnown RBP23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 ARID5AQ03989 594 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 TRIML1Q8N9V2 468 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 NOX5Q96PH1 765 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 XAGE2Q96GT9 111 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 MCM9Q9NXL9 1143 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 SWAP70Q9UH65 585 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 ATP8B1O43520 1251 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 IRX3P78415 501 aaPredicted RBP23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 TTC38Q5R3I4 469 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 CSGALNACT2Q8N6G5 542 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 MTX1Q13505 466 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 TTC6Q86TZ1 520 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 MIGA1Q8NAN2 632 aa23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 ZNF215Q9UL58 517 aaPredicted RBP23.76■■□□□ 1.39
TGFBR1-202ENST00000374994 GOLGA6BA6NDN3 693 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 E7EWF7 191 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 CMA1P23946 247 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 OTUD7BQ6GQQ9 843 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 RUFY4Q6ZNE9 571 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 IL2RBP14784 551 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 INPP5BP32019 993 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 GRIPAP1Q4V328 841 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 DZIP3Q86Y13 1208 aaKnown RBP23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 ANKRD2Q9GZV1 360 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 A0A1W2PQ27 194 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 A0A1W2PQ64 194 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 A0A1W2PQD8 194 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 PDE4DQ08499 809 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 ATP5DP30049 168 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 DENND2AQ9ULE3 1009 aa23.75■■□□□ 1.39
TGFBR1-202ENST00000374994 PCDH11XQ9BZA7 1347 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 PCDH11YQ9BZA8 1340 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 ZNF804AQ7Z570 1209 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 RSRC1Q96IZ7 334 aaKnown RBP23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 SAMM50Q9Y512 469 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 TNNI2P48788 182 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 PUM3Q15397 648 aaKnown RBP23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 SETDB1Q15047 1291 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 TPCN1Q9ULQ1 816 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 CCDC84Q86UT8 332 aaPredicted RBP23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 PPP1R14CQ8TAE6 165 aa23.74■■□□□ 1.39
TGFBR1-202ENST00000374994 CEP128Q6ZU80 1094 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 NR1I2O75469 434 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 PAK2Q13177 524 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 CCDC50Q8IVM0 306 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 KIAA1524Q8TCG1 905 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 SREK1Q8WXA9 508 aaKnown RBP23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 PFKFB1P16118 471 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 USP28Q96RU2 1077 aa23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 NUCKS1Q9H1E3 243 aaKnown RBP23.73■■□□□ 1.39
TGFBR1-202ENST00000374994 FAM13AO94988 1023 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 SMARCC2Q8TAQ2 1214 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 IFT74Q96LB3 600 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 TRAF5O00463 557 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 UTP14CQ5TAP6 766 aaKnown RBP23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 CLUL1Q15846 466 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 ACTN4O43707 911 aaKnown RBP23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 PTH1RQ03431 593 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 CLASP1Q7Z460 1538 aa23.72■■□□□ 1.39
TGFBR1-202ENST00000374994 A0A1B0GUA9 196 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 KLHDC4Q8TBB5 520 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 SLC9C1Q4G0N8 1177 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 KDRP35968 1356 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 LACTBP83111 547 aaPredicted RBP23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 SPDYE3A6NKU9 549 aa23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 UBLCP1Q8WVY7 318 aaPredicted RBP23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 MRVI1Q9Y6F6 885 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms