RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PRDX5P30044 214 aa21.26■□□□□ 0.99
RXRB-202ENST00000374685 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
RXRB-202ENST00000374685 PPARAQ07869 468 aa21.26■□□□□ 0.99
RXRB-202ENST00000374685 TRAPPC3LQ5T215 181 aa21.26■□□□□ 0.99
RXRB-202ENST00000374685 CPLX2Q6PUV4 134 aaKnown RBP21.26■□□□□ 0.99
RXRB-202ENST00000374685 RTL9Q8NET4 1388 aa21.26■□□□□ 0.99
RXRB-202ENST00000374685 RANBP6O60518 1105 aaKnown RBP21.26■□□□□ 0.99
RXRB-202ENST00000374685 RCOR1Q9UKL0 485 aa21.26■□□□□ 0.99
RXRB-202ENST00000374685 hCG_1642624A0A1W2PR95 340 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 SEPT12Q8IYM1 358 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 TMEM87BQ96K49 555 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 PCDHA7Q9UN72 937 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 ERICH2A1L162 156 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 WTAPQ15007 396 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 FBXL16Q8N461 479 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 TTC12Q9H892 705 aaPredicted RBP21.25■□□□□ 0.99
RXRB-202ENST00000374685 CCDC39Q9UFE4 941 aa21.25■□□□□ 0.99
RXRB-202ENST00000374685 HIBADHP31937 336 aaKnown RBP21.24■□□□□ 0.99
RXRB-202ENST00000374685 ZNF384Q8TF68 577 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 UBAC1Q9BSL1 405 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 KINO60870 393 aaKnown RBP21.24■□□□□ 0.99
RXRB-202ENST00000374685 ATP2B1P20020 1258 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 GUCY1A2P33402 732 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 KRT40Q6A162 431 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 KRT23Q9C075 422 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.24■□□□□ 0.99
RXRB-202ENST00000374685 GNAT2P19087 354 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 HSPA1LP34931 641 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 ALX1Q15699 326 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 MYSM1Q5VVJ2 828 aa21.24■□□□□ 0.99
RXRB-202ENST00000374685 CCDC94Q9BW85 323 aaPredicted RBP21.24■□□□□ 0.99
RXRB-202ENST00000374685 SART3Q15020 963 aaKnown RBP21.23■□□□□ 0.99
RXRB-202ENST00000374685 ZNF804BA4D1E1 1349 aa21.23■□□□□ 0.99
RXRB-202ENST00000374685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.23■□□□□ 0.99
RXRB-202ENST00000374685 KIF23Q02241 960 aaPredicted RBP21.23■□□□□ 0.99
RXRB-202ENST00000374685 NFIXQ14938 502 aa21.23■□□□□ 0.99
RXRB-202ENST00000374685 CNNM2Q9H8M5 875 aa21.23■□□□□ 0.99
RXRB-202ENST00000374685 FAM217BQ9NTX9 383 aaPredicted RBP21.23■□□□□ 0.99
RXRB-202ENST00000374685 KCNJ14Q9UNX9 436 aa21.23■□□□□ 0.99
RXRB-202ENST00000374685 ZSCAN20P17040 1043 aaPredicted RBP21.22■□□□□ 0.99
RXRB-202ENST00000374685 MECOMQ03112 1051 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 TRIM29Q14134 588 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 FAM200AQ8TCP9 573 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 PIBF1Q8WXW3 757 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 SDF4Q9BRK5 362 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 CBX8Q9HC52 389 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 CDKL5O76039 1030 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 RC3H1Q5TC82 1133 aaKnown RBP21.22■□□□□ 0.99
RXRB-202ENST00000374685 C17orf53Q8N3J3 647 aaPredicted RBP21.22■□□□□ 0.99
RXRB-202ENST00000374685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.22■□□□□ 0.99
RXRB-202ENST00000374685 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
RXRB-202ENST00000374685 USP17L12C9JPN9 530 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 USP17L21D6R901 530 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 UVSSAQ2YD98 709 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 CNBD1Q8NA66 436 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 ZNF165P49910 485 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 SLC10A5Q5PT55 438 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 RIOK1Q9BRS2 568 aaKnown RBP21.21■□□□□ 0.99
RXRB-202ENST00000374685 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
RXRB-202ENST00000374685 COL5A3P25940 1745 aaPredicted RBP21.21■□□□□ 0.99
RXRB-202ENST00000374685 SPTLC2O15270 562 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 NDUFA8P51970 172 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 SSRP1Q08945 709 aaKnown RBP21.2■□□□□ 0.98
RXRB-202ENST00000374685 RTN1Q16799 776 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 LINC00301Q8NCQ3 95 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 PRDM10Q9NQV6 1147 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 WDR19Q8NEZ3 1342 aa21.2■□□□□ 0.98
RXRB-202ENST00000374685 CYP2D6P10635 497 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 ISM2Q6H9L7 571 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 TNKSO95271 1327 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 BTAF1O14981 1849 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 NMT2O60551 498 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 SNW1Q13573 536 aaKnown RBP21.19■□□□□ 0.98
RXRB-202ENST00000374685 NTRK3Q16288 839 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 FAM47AQ5JRC9 791 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 DRC7Q8IY82 874 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 MRPS27Q92552 414 aaKnown RBP21.19■□□□□ 0.98
RXRB-202ENST00000374685 BIN1O00499 593 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 FBXO33Q7Z6M2 555 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 DZIP1Q86YF9 867 aaKnown RBP21.19■□□□□ 0.98
RXRB-202ENST00000374685 RTEL1Q9NZ71 1219 aa21.19■□□□□ 0.98
RXRB-202ENST00000374685 BAZ2BQ9UIF8 2168 aaKnown RBP21.18■□□□□ 0.98
RXRB-202ENST00000374685 TRIM37O94972 964 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 FAM160A1Q05DH4 1040 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 ANO1Q5XXA6 986 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 SGMS1Q86VZ5 419 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 NSUN4Q96CB9 384 aaKnown RBP21.18■□□□□ 0.98
RXRB-202ENST00000374685 RNF41Q9H4P4 317 aaPredicted RBP21.18■□□□□ 0.98
RXRB-202ENST00000374685 LIFRP42702 1097 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 C11orf57Q6ZUT1 292 aaPredicted RBP21.18■□□□□ 0.98
RXRB-202ENST00000374685 ZNF654Q8IZM8 581 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 ESR2Q92731 530 aa21.18■□□□□ 0.98
RXRB-202ENST00000374685 TM4SF1P30408 202 aa21.17■□□□□ 0.98
RXRB-202ENST00000374685 RREB1Q92766 1687 aa21.17■□□□□ 0.98
RXRB-202ENST00000374685 BTBD18B2RXH4 712 aa21.17■□□□□ 0.98
RXRB-202ENST00000374685 DIXDC1Q155Q3 683 aa21.17■□□□□ 0.98
RXRB-202ENST00000374685 SPECC1Q5M775 1068 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms