RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 AKNAD1Q5T1N1 836 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 ATL3Q6DD88 541 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 SHC4Q6S5L8 630 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 UBR2Q8IWV8 1755 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 NPHP1O15259 732 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 YEATS4O95619 227 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 PIP4K2BP78356 416 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 CCDC152Q4G0S7 254 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 NAT10Q9H0A0 1025 aaKnown RBP19.73■□□□□ 0.75
RXRB-201ENST00000374680 SLC39A14Q15043 492 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 NTRK3Q16288 839 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 PTF1AQ7RTS3 328 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 PRDM10Q9NQV6 1147 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 ABCC6O95255 1503 aa19.73■□□□□ 0.75
RXRB-201ENST00000374680 WTAPQ15007 396 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 GLIPR1L2Q4G1C9 344 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 CAMTA2O94983 1202 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 FBXL16Q8N461 479 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 A0A1W2PQ27 194 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 A0A1W2PQ64 194 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 A0A1W2PQD8 194 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 CDKL5O76039 1030 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 GRAMD1CQ8IYS0 662 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 OXER1Q8TDS5 423 aa19.72■□□□□ 0.75
RXRB-201ENST00000374680 SLC51AQ86UW1 340 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 DIS3L2Q8IYB7 885 aaKnown RBP19.71■□□□□ 0.75
RXRB-201ENST00000374680 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.71■□□□□ 0.75
RXRB-201ENST00000374680 MTMR7Q9Y216 660 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 SPDYE4A6NLX3 237 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 RTN1Q16799 776 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 NACAP1Q9BZK3 213 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 TFCP2L1Q9NZI6 479 aa19.71■□□□□ 0.75
RXRB-201ENST00000374680 ERICH2A1L162 156 aa19.7■□□□□ 0.74
RXRB-201ENST00000374680 FAM205CA6NFA0 338 aa19.7■□□□□ 0.74
RXRB-201ENST00000374680 CMA1P23946 247 aa19.7■□□□□ 0.74
RXRB-201ENST00000374680 KLRK1P26718 216 aa19.7■□□□□ 0.74
RXRB-201ENST00000374680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.7■□□□□ 0.74
RXRB-201ENST00000374680 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
RXRB-201ENST00000374680 CNNM3Q8NE01 707 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 UBAC1Q9BSL1 405 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 AKAP11Q9UKA4 1901 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 SHANK3Q9BYB0 1731 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 CAVIN2O95810 425 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 NBPF11Q86T75 865 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 CBX1P83916 185 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 USP49Q70CQ1 688 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 MRFAP1L1Q96HT8 127 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 ZNF512BQ96KM6 892 aaPredicted RBP19.69■□□□□ 0.74
RXRB-201ENST00000374680 CABP5Q9NP86 173 aa19.69■□□□□ 0.74
RXRB-201ENST00000374680 FOXP4Q8IVH2 680 aaPredicted RBP19.68■□□□□ 0.74
RXRB-201ENST00000374680 DPF2Q92785 391 aa19.68■□□□□ 0.74
RXRB-201ENST00000374680 PCDHB6Q9Y5E3 794 aa19.68■□□□□ 0.74
RXRB-201ENST00000374680 NTSR2O95665 410 aa19.68■□□□□ 0.74
RXRB-201ENST00000374680 PTPAQ15257 358 aa19.68■□□□□ 0.74
RXRB-201ENST00000374680 CELF1Q92879 486 aaKnown RBP19.68■□□□□ 0.74
RXRB-201ENST00000374680 VPS54Q9P1Q0 977 aa19.68■□□□□ 0.74
RXRB-201ENST00000374680 SLIT2O94813 1529 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 NLRP12P59046 1061 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 PPARAQ07869 468 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 FAM98CQ17RN3 349 aaKnown RBP19.67■□□□□ 0.74
RXRB-201ENST00000374680 TICAM2Q86XR7 235 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 TRIM22Q8IYM9 498 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 SERPINC1P01008 464 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 SART3Q15020 963 aaKnown RBP19.67■□□□□ 0.74
RXRB-201ENST00000374680 SAFBQ15424 915 aaKnown RBP eCLIP19.67■□□□□ 0.74
RXRB-201ENST00000374680 PPP4R3BQ5MIZ7 849 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 SARM1Q6SZW1 724 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 KCNH3Q9ULD8 1083 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 PCDHA5Q9Y5H7 936 aa19.67■□□□□ 0.74
RXRB-201ENST00000374680 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 NMT2O60551 498 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 CASP1P29466 404 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 CEP135Q66GS9 1140 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 MAP3K14Q99558 947 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 KRT23Q9C075 422 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 POLR2DO15514 142 aaKnown RBP19.66■□□□□ 0.74
RXRB-201ENST00000374680 TOB1P50616 345 aaPredicted RBP19.66■□□□□ 0.74
RXRB-201ENST00000374680 ANKRD18AQ8IVF6 992 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 ZNF654Q8IZM8 581 aa19.66■□□□□ 0.74
RXRB-201ENST00000374680 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
RXRB-201ENST00000374680 CCZ1BP86790 482 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 CCZ1P86791 482 aaPredicted RBP19.65■□□□□ 0.74
RXRB-201ENST00000374680 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
RXRB-201ENST00000374680 NOSTRINQ8IVI9 506 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 TRMT44Q8IYL2 757 aaKnown RBP19.65■□□□□ 0.74
RXRB-201ENST00000374680 PTPN14Q15678 1187 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 CFAP100Q494V2 611 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 FAM47AQ5JRC9 791 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 SGMS1Q86VZ5 419 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 FANCBQ8NB91 859 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 TNKSO95271 1327 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 FANCCQ00597 558 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 NCAPHQ15003 741 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 METTL16Q86W50 562 aaKnown RBP19.65■□□□□ 0.74
RXRB-201ENST00000374680 JMYQ8N9B5 988 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 CCDC112Q8NEF3 446 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms