RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 UPF2Q9HAU5 1272 aaKnown RBP15.29■□□□□ 0.04
GJB1-202ENST00000374022 RBM8AQ9Y5S9 174 aaKnown RBP15.29■□□□□ 0.04
GJB1-202ENST00000374022 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
GJB1-202ENST00000374022 FGAP02671 866 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 EPHX2P34913 555 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 NFIAQ12857 509 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 PICALMQ13492 652 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 ALX1Q15699 326 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 IDI2Q9BXS1 227 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
GJB1-202ENST00000374022 DDX4Q9NQI0 724 aaKnown RBP15.29■□□□□ 0.04
GJB1-202ENST00000374022 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
GJB1-202ENST00000374022 SIPA1L1O43166 1804 aa15.28■□□□□ 0.04
GJB1-202ENST00000374022 HIRAP54198 1017 aaPredicted RBP15.28■□□□□ 0.04
GJB1-202ENST00000374022 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
GJB1-202ENST00000374022 POTECB2RU33 542 aa15.27■□□□□ 0.04
GJB1-202ENST00000374022 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
GJB1-202ENST00000374022 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
GJB1-202ENST00000374022 MCM9Q9NXL9 1143 aa15.27■□□□□ 0.04
GJB1-202ENST00000374022 FAM198AQ9UFP1 575 aa15.27■□□□□ 0.04
GJB1-202ENST00000374022 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
GJB1-202ENST00000374022 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.03
GJB1-202ENST00000374022 NECTIN1Q15223 517 aa15.27■□□□□ 0.03
GJB1-202ENST00000374022 USP50Q70EL3 339 aaPredicted RBP15.27■□□□□ 0.03
GJB1-202ENST00000374022 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.03
GJB1-202ENST00000374022 TAF1DQ9H5J8 278 aaPredicted RBP15.27■□□□□ 0.03
GJB1-202ENST00000374022 MCCP23508 829 aa15.26■□□□□ 0.03
GJB1-202ENST00000374022 TCP10Q12799 353 aa15.26■□□□□ 0.03
GJB1-202ENST00000374022 ARPP21Q9UBL0 812 aaPredicted RBP15.26■□□□□ 0.03
GJB1-202ENST00000374022 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
GJB1-202ENST00000374022 COL2A1P02458 1487 aaPredicted RBP15.26■□□□□ 0.03
GJB1-202ENST00000374022 CNTNAP1P78357 1384 aa15.26■□□□□ 0.03
GJB1-202ENST00000374022 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 USP17L21D6R901 530 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 ENTPD3O75355 529 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 HSPA4P34932 840 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 ANGEL2Q5VTE6 544 aaKnown RBP15.25■□□□□ 0.03
GJB1-202ENST00000374022 CREB3L3Q68CJ9 461 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 GGA3Q9NZ52 723 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 SLC27A2O14975 620 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 TNFAIP1Q13829 316 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 IMMTQ16891 758 aaKnown RBP15.25■□□□□ 0.03
GJB1-202ENST00000374022 SLC4A8Q2Y0W8 1093 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 FAM83AQ86UY5 434 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
GJB1-202ENST00000374022 AMOTL1Q8IY63 956 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
GJB1-202ENST00000374022 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 RRAGCQ9HB90 399 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
GJB1-202ENST00000374022 CYP2D7A0A087X1C5 515 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 MINDY4BA8MYZ0 360 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 POLR3DP05423 398 aaPredicted RBP15.24■□□□□ 0.03
GJB1-202ENST00000374022 CYP21A2P08686 494 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
GJB1-202ENST00000374022 TNNI2P48788 182 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 HAND2P61296 217 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 RNF20Q5VTR2 975 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 PNMA8AQ86V59 439 aaPredicted RBP15.24■□□□□ 0.03
GJB1-202ENST00000374022 ZFPM1Q8IX07 1006 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
GJB1-202ENST00000374022 ZNF213O14771 459 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 CYP2D6P10635 497 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 PPARAQ07869 468 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
GJB1-202ENST00000374022 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 C12orf60Q5U649 245 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
GJB1-202ENST00000374022 ZC3H15Q8WU90 426 aaKnown RBP15.23■□□□□ 0.03
GJB1-202ENST00000374022 TBC1D32Q96NH3 1257 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 NMRK2Q9NPI5 230 aa15.23■□□□□ 0.03
GJB1-202ENST00000374022 SCAF8Q9UPN6 1271 aaKnown RBP15.23■□□□□ 0.03
GJB1-202ENST00000374022 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
GJB1-202ENST00000374022 RBM25P49756 843 aaKnown RBP15.22■□□□□ 0.03
GJB1-202ENST00000374022 PLCD1P51178 756 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 EVX2Q03828 476 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 RASA3Q14644 834 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 SH3BP5LQ7L8J4 393 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 KCNB2Q92953 911 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
GJB1-202ENST00000374022 ANAPC4Q9UJX5 808 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 TAF6LQ9Y6J9 622 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
GJB1-202ENST00000374022 DDTLA6NHG4 134 aaPredicted RBP15.21■□□□□ 0.03
GJB1-202ENST00000374022 SMIM22K7EJ46 135 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 CTDSPL2Q05D32 466 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 TBC1D10CQ8IV04 446 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 DCPSQ96C86 337 aaKnown RBP15.21■□□□□ 0.03
GJB1-202ENST00000374022 SNX14Q9Y5W7 946 aa15.21■□□□□ 0.03
GJB1-202ENST00000374022 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.02
GJB1-202ENST00000374022 SLC3A2P08195 630 aaKnown RBP15.2■□□□□ 0.02
GJB1-202ENST00000374022 ANAPC15P60006 121 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms