RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
SP140-202ENST00000373645 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 LAMA3Q16787 3333 aa9.53□□□□□ -0.88
SP140-202ENST00000373645 TLR2O60603 784 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 SEC24BO95487 1268 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 CHAF1AQ13111 956 aaPredicted RBP9.52□□□□□ -0.89
SP140-202ENST00000373645 SSH3Q8TE77 659 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 WRNIP1Q96S55 665 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 CNNM1Q9NRU3 951 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 CSADQ9Y600 493 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.89
SP140-202ENST00000373645 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 HIBADHP31937 336 aaKnown RBP9.51□□□□□ -0.89
SP140-202ENST00000373645 INPP5BP32019 993 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 CCDC57Q2TAC2 916 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 NBPF11Q86T75 865 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
SP140-202ENST00000373645 SOX1O00570 391 aaPredicted RBP9.5□□□□□ -0.89
SP140-202ENST00000373645 CETPP11597 493 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 OSBPP22059 807 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 LRRC24Q50LG9 513 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 APOBEC3HQ6NTF7 200 aaKnown RBP9.5□□□□□ -0.89
SP140-202ENST00000373645 CENPQQ7L2Z9 268 aaPredicted RBP9.5□□□□□ -0.89
SP140-202ENST00000373645 MIGA2Q7L4E1 593 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 UBE2Q1Q7Z7E8 422 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 ERO1BQ86YB8 467 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 DCTPP1Q9H773 170 aa9.5□□□□□ -0.89
SP140-202ENST00000373645 PSMC4P43686 418 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 PPIL2Q13356 520 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 SNAPC2Q13487 334 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 MOGSQ13724 837 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 C17orf99Q6UX52 265 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 FBXO33Q7Z6M2 555 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 KLHDC4Q8TBB5 520 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 DPF3Q92784 378 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 SRRDQ9UH36 339 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 RIPOR2Q9Y4F9 1068 aa9.49□□□□□ -0.89
SP140-202ENST00000373645 COL6A3P12111 3177 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 SURF6O75683 361 aaKnown RBP9.48□□□□□ -0.89
SP140-202ENST00000373645 SLURP2P0DP57 97 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 CCL5P13501 91 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 TIE1P35590 1138 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
SP140-202ENST00000373645 TNNI2P48788 182 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 BCAMP50895 628 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 PRKCZQ05513 592 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 KIF22Q14807 665 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 SMC5Q8IY18 1101 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 VGLL2Q8N8G2 317 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 TEKT1Q969V4 418 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 KIF12Q96FN5 646 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 ZDHHC15Q96MV8 337 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
SP140-202ENST00000373645 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
SP140-202ENST00000373645 PDHXO00330 501 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 CYP2C8P10632 490 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 GRK4P32298 578 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 TCP10Q12799 353 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 NFIAQ12857 509 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 G3BP1Q13283 466 aaKnown RBP eCLIP9.47□□□□□ -0.89
SP140-202ENST00000373645 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 UNC93B1Q9H1C4 597 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.47□□□□□ -0.89
SP140-202ENST00000373645 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 GABRQQ9UN88 632 aa9.47□□□□□ -0.89
SP140-202ENST00000373645 RPAP1Q9BWH6 1393 aaPredicted RBP9.47□□□□□ -0.89
SP140-202ENST00000373645 ALPK3Q96L96 1907 aa9.46□□□□□ -0.89
SP140-202ENST00000373645 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 FMNL1O95466 1100 aaPredicted RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 ELNP15502 786 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 GJA8P48165 433 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 MMRN1Q13201 1228 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 METTL24Q5JXM2 366 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 FAM83AQ86UY5 434 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 VPS37DQ86XT2 251 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 ERC1Q8IUD2 1116 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 ZFPM1Q8IX07 1006 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 RAET1EQ8TD07 263 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 U2AF1L4Q8WU68 220 aaKnown RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 ZCCHC17Q9NP64 241 aaKnown RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 PA2G4Q9UQ80 394 aaKnown RBP9.46□□□□□ -0.9
SP140-202ENST00000373645 TRPC6Q9Y210 931 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 EXOC6BQ9Y2D4 811 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.9
SP140-202ENST00000373645 MGAMO43451 1857 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms