RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 SH3RF3Q8TEJ3 882 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 DDX4Q9NQI0 724 aaKnown RBP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 WBP1LQ9NX94 342 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-201ENST00000373554 CSADQ9Y600 493 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 OTOFQ9HC10 1997 aa14.58□□□□□ -0.08
HDAC8-201ENST00000373554 ERC2O15083 957 aa14.57□□□□□ -0.08
HDAC8-201ENST00000373554 KIF23Q02241 960 aaPredicted RBP14.57□□□□□ -0.08
HDAC8-201ENST00000373554 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
HDAC8-201ENST00000373554 CLMNQ96JQ2 1002 aa14.57□□□□□ -0.08
HDAC8-201ENST00000373554 WRNIP1Q96S55 665 aa14.57□□□□□ -0.08
HDAC8-201ENST00000373554 ATRNL1Q5VV63 1379 aa14.57□□□□□ -0.08
HDAC8-201ENST00000373554 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
HDAC8-201ENST00000373554 PDE6AP16499 860 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 MX1P20591 662 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 MAP3K9P80192 1104 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 VGLL4Q14135 290 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 TSHZ3Q63HK5 1081 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 ZFPM1Q8IX07 1006 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 MIGA1Q8NAN2 632 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 ZIC5Q96T25 663 aa14.56□□□□□ -0.08
HDAC8-201ENST00000373554 OSBPL5Q9H0X9 879 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-201ENST00000373554 AK9Q5TCS8 1911 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-201ENST00000373554 CA12O43570 354 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 ZBTB48P10074 688 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-201ENST00000373554 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
HDAC8-201ENST00000373554 SPRYD7Q5W111 196 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 ZSCAN25Q6NSZ9 544 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-201ENST00000373554 SMC5Q8IY18 1101 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 WNK4Q96J92 1243 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 FLT1P17948 1338 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 ZNF532Q9HCE3 1301 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 PCNTO95613 3336 aa14.55□□□□□ -0.08
HDAC8-201ENST00000373554 MAGEB6P1A0A0J9YX57 407 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 FOXN1O15353 648 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 GLRX3O76003 335 aaKnown RBP14.54□□□□□ -0.08
HDAC8-201ENST00000373554 USP5P45974 858 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 CTCFP49711 727 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-201ENST00000373554 DYNLL1P63167 89 aaKnown RBP14.54□□□□□ -0.08
HDAC8-201ENST00000373554 SREBF2Q12772 1141 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 SH3BP5LQ7L8J4 393 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
HDAC8-201ENST00000373554 OTUD7AQ8TE49 926 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-201ENST00000373554 DHX36Q9H2U1 1008 aaKnown RBP14.54□□□□□ -0.08
HDAC8-201ENST00000373554 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 MANSC4A6NHS7 340 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-201ENST00000373554 IGHDP01880 384 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 ADD2P35612 726 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 B4GALNT3Q6L9W6 998 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 RIOK1Q9BRS2 568 aaKnown RBP14.53□□□□□ -0.08
HDAC8-201ENST00000373554 LNPKQ9C0E8 428 aa14.53□□□□□ -0.08
HDAC8-201ENST00000373554 SALL3Q9BXA9 1300 aa14.52□□□□□ -0.08
HDAC8-201ENST00000373554 TCRBV5S4A2TA0A5A2 114 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 UBE3CQ15386 1083 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.09
HDAC8-201ENST00000373554 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 PI4K2BQ8TCG2 481 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 ZKSCAN4Q969J2 545 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-201ENST00000373554 OTUD5Q96G74 571 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 CRNKL1Q9BZJ0 848 aaKnown RBP14.52□□□□□ -0.09
HDAC8-201ENST00000373554 SAGE1Q9NXZ1 904 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 ZNF112Q9UJU3 913 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 SNCAIPQ9Y6H5 919 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.09
HDAC8-201ENST00000373554 MYH7P12883 1935 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 HLA-DOAP06340 250 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 INPP5BP32019 993 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 NOL9Q5SY16 702 aaKnown RBP14.51□□□□□ -0.09
HDAC8-201ENST00000373554 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 ERO1BQ86YB8 467 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC8-201ENST00000373554 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
HDAC8-201ENST00000373554 LAMB1P07942 1786 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 TBC1D12O60347 775 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 MBD4O95243 580 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 ZFYP08048 801 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-201ENST00000373554 HSPA8P11142 646 aaKnown RBP14.5□□□□□ -0.09
HDAC8-201ENST00000373554 GJA5P36382 358 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 TM4SF4P48230 202 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 PDE1AP54750 535 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 INHBEP58166 350 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 MAP3K10Q02779 954 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 NUCB1Q02818 461 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 SCYL3Q8IZE3 742 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 LCORLQ8N3X6 602 aa14.5□□□□□ -0.09
HDAC8-201ENST00000373554 CRACR2BQ8N4Y2 399 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-201ENST00000373554 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms