RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 RFX7Q2KHR2 1363 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
PGK1-201ENST00000373316 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 SLC4A4Q9Y6R1 1079 aa12.03□□□□□ -0.48
PGK1-201ENST00000373316 MROH5Q6ZUA9 1318 aa12.02□□□□□ -0.48
PGK1-201ENST00000373316 NDC80O14777 642 aa12.02□□□□□ -0.48
PGK1-201ENST00000373316 ZNF500O60304 480 aaPredicted RBP12.02□□□□□ -0.48
PGK1-201ENST00000373316 GNG11P61952 73 aa12.02□□□□□ -0.48
PGK1-201ENST00000373316 CABP5Q9NP86 173 aa12.02□□□□□ -0.48
PGK1-201ENST00000373316 ZBTB1Q9Y2K1 713 aa12.02□□□□□ -0.48
PGK1-201ENST00000373316 HLFQ16534 295 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
PGK1-201ENST00000373316 ARFGAP2Q8N6H7 521 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 TBC1D5Q92609 795 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 ANKIB1Q9P2G1 1089 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 PHLPP1O60346 1717 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 HSF2BPO75031 334 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 CHGBP05060 677 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 SSBP05455 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
PGK1-201ENST00000373316 TRIM47Q96LD4 638 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 CDC25BP30305 580 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 RPGRIP1Q96KN7 1286 aa12.02□□□□□ -0.49
PGK1-201ENST00000373316 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 CTR9Q6PD62 1173 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 TRIML1Q8N9V2 468 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
PGK1-201ENST00000373316 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 CYP7A1P22680 504 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 GABPB1Q06547 395 aaPredicted RBP12.01□□□□□ -0.49
PGK1-201ENST00000373316 RRAGBQ5VZM2 374 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 FAM177A1Q8N128 213 aaPredicted RBP12.01□□□□□ -0.49
PGK1-201ENST00000373316 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
PGK1-201ENST00000373316 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
PGK1-201ENST00000373316 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
PGK1-201ENST00000373316 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
PGK1-201ENST00000373316 MAST3O60307 1309 aa12□□□□□ -0.49
PGK1-201ENST00000373316 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
PGK1-201ENST00000373316 AOPEPQ8N6M6 819 aa12□□□□□ -0.49
PGK1-201ENST00000373316 NLRP3Q96P20 1036 aa12□□□□□ -0.49
PGK1-201ENST00000373316 USP21Q9UK80 565 aa12□□□□□ -0.49
PGK1-201ENST00000373316 TBCAO75347 108 aaKnown RBP12□□□□□ -0.49
PGK1-201ENST00000373316 NLRP12P59046 1061 aa12□□□□□ -0.49
PGK1-201ENST00000373316 KLHL10Q6JEL2 608 aa12□□□□□ -0.49
PGK1-201ENST00000373316 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
PGK1-201ENST00000373316 EDC3Q96F86 508 aaKnown RBP12□□□□□ -0.49
PGK1-201ENST00000373316 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
PGK1-201ENST00000373316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■□□□□ 11
PGK1-201ENST00000373316 SCN11AQ9UI33 1791 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 PDE8AO60658 829 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 TFCP2Q12800 502 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
PGK1-201ENST00000373316 GCKRQ14397 625 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 CCDC96Q2M329 555 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
PGK1-201ENST00000373316 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 DNAJC25Q9H1X3 360 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 IL25Q9H293 177 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 MTMR7Q9Y216 660 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 CIAO1O76071 339 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 ANO1Q5XXA6 986 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 GALNT17Q6IS24 598 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 UBE2Q2Q8WVN8 375 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
PGK1-201ENST00000373316 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 TDRD12Q587J7 1177 aaKnown RBP11.99□□□□□ -0.49
PGK1-201ENST00000373316 TIGD1Q96MW7 591 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
PGK1-201ENST00000373316 RBM5P52756 815 aaKnown RBP eCLIP11.98□□□□□ -0.496e-8■■□□□ 12
PGK1-201ENST00000373316 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 FERMT1Q9BQL6 677 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 B4DLN1 442 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 IGSF3O75054 1194 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
PGK1-201ENST00000373316 IFFO1Q0D2I5 559 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 CCDC155Q8N6L0 562 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 MAGEF1Q9HAY2 307 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 NEFHP12036 1026 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 ZNF75DP51815 510 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 SLFNL1Q499Z3 407 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms