RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 NOB1Q9ULX3 412 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 AFG3L2Q9Y4W6 797 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 A0A0G2JLL6 359 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 ADORA1P30542 326 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 GJA8P48165 433 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 FCGRTP55899 365 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 PRRT2Q7Z6L0 340 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 SLC45A1Q9Y2W3 748 aa16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 LRRFIP2Q9Y608 721 aaKnown RBP16.25■□□□□ 0.19
TRAPPC3-201ENST00000373159 PDS5AQ29RF7 1337 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 CTNND1O60716 968 aaKnown RBP16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 CCL5P13501 91 aa16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 TIMM10P62072 90 aa16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 SPTY2D1Q68D10 685 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
TRAPPC3-201ENST00000373159 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 UBXN2AP68543 259 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 PRKCZQ05513 592 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 DZIP1Q86YF9 867 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 ZSCAN29Q8IWY8 852 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 SLAIN1Q8ND83 568 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 DPF3Q92784 378 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
TRAPPC3-201ENST00000373159 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 GPR75-ASB3A0A0A6YYF3 556 aa16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 TBC1D12O60347 775 aa16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 GABRQQ9UN88 632 aa16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
TRAPPC3-201ENST00000373159 CAPN2P17655 700 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 BTDP43251 543 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 GADL1Q6ZQY3 521 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 MEIS3Q99687 375 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
TRAPPC3-201ENST00000373159 RANBP2P49792 3224 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 A0A1B0GUL7 405 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 ADCY3O60266 1144 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 SGPL1O95470 568 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 FLT3LGP49771 235 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 RHBDL3P58872 404 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 MECOMQ03112 1051 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 TFCP2Q12800 502 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 MTX1Q13505 466 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 U2AF1L4Q8WU68 220 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-201ENST00000373159 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 TRIM75PA6NK02 468 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 SRGAP3O43295 1099 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 GNAI3P08754 354 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 SLURP2P0DP57 97 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 PICALMQ13492 652 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 IRF5Q13568 498 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 AGTPBP1Q9UPW5 1226 aa16.19■□□□□ 0.18
TRAPPC3-201ENST00000373159 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 LDHCP07864 332 aa16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 SMCR8Q8TEV9 937 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
TRAPPC3-201ENST00000373159 MYH13Q9UKX3 1938 aa16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 GSTO1P78417 241 aa16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 NSUN4Q96CB9 384 aaKnown RBP16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 NEUROD6Q96NK8 337 aa16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 OSBPL5Q9H0X9 879 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
TRAPPC3-201ENST00000373159 SZT2Q5T011 3432 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 FARP2O94887 1054 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 INHAP05111 366 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 ELNP15502 786 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 COA7Q96BR5 231 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC3-201ENST00000373159 MYH2Q9UKX2 1941 aa16.15■□□□□ 0.18
TRAPPC3-201ENST00000373159 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
TRAPPC3-201ENST00000373159 SPP2Q13103 211 aa16.15■□□□□ 0.18
TRAPPC3-201ENST00000373159 FAM110CQ1W6H9 321 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms