RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 LARGE1O95461 756 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 FAM193AP78312 1265 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 CBX1P83916 185 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 TNIP1Q15025 636 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 TTC6Q86TZ1 520 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
TSPAN1-201ENST00000372003 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 YY1P25490 414 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 ZNF75DP51815 510 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 ME3Q16798 604 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 TSGA10IPQ3SY00 556 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 SARM1Q6SZW1 724 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 MAP4K1Q92918 833 aa13.36□□□□□ -0.27
TSPAN1-201ENST00000372003 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 RASGRF1Q13972 1273 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 SCARF1Q14162 830 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 PI16Q6UXB8 463 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 GPC2Q8N158 579 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 PRDM10Q9NQV6 1147 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 KCND1Q9NSA2 647 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 GOLGA6L4A6NEF3 574 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 CTAGE5O15320 804 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 UQCRFS1P1P0C7P4 283 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 PTGS1P23219 599 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 MCAMP43121 646 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 DACT2Q5SW24 774 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 TSC1Q92574 1164 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
TSPAN1-201ENST00000372003 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 PTH1RQ03431 593 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 NCBP1Q09161 790 aaKnown RBP13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 SPATA5Q8NB90 893 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 BOLA2Q9H3K6 86 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
TSPAN1-201ENST00000372003 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 SEMA3EO15041 775 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 TNNT1P13805 278 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 KRT32Q14532 448 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 DHX8Q14562 1220 aaKnown RBP13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 SPATA32Q96LK8 384 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 ZSCAN16Q9H4T2 348 aaPredicted RBP13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 RBM8AQ9Y5S9 174 aaKnown RBP13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 SBF1O95248 1867 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
TSPAN1-201ENST00000372003 LIG1P18858 919 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ZAP70P43403 619 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ATL3Q6DD88 541 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 WDR66Q8TBY9 1149 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ZNF512BQ96KM6 892 aaPredicted RBP13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 DNAJC2Q99543 621 aaKnown RBP13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ARID3AQ99856 593 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 CTNNA3Q9UI47 895 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 DDX41Q9UJV9 622 aaKnown RBP13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 MORC2Q9Y6X9 1032 aaPredicted RBP13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
TSPAN1-201ENST00000372003 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 SLC27A2O14975 620 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 TUBB4AP04350 444 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 ATP5JP18859 108 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 SCNN1DP51172 638 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 GRIK5Q16478 980 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 DRC7Q8IY82 874 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 DACT1Q9NYF0 836 aa13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
TSPAN1-201ENST00000372003 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms