RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 IRS2Q9Y4H2 1338 aa23.14■■□□□ 1.3
LHX3-202ENST00000371748 GOLGA8AA7E2F4 631 aa23.14■■□□□ 1.29
LHX3-202ENST00000371748 SLC27A3Q5K4L6 730 aa23.14■■□□□ 1.29
LHX3-202ENST00000371748 PHKBQ93100 1093 aa23.14■■□□□ 1.29
LHX3-202ENST00000371748 TAOK2Q9UL54 1235 aa23.14■■□□□ 1.29
LHX3-202ENST00000371748 SLC12A7Q9Y666 1083 aa23.14■■□□□ 1.29
LHX3-202ENST00000371748 ECM29Q5VYK3 1845 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 PDS5AQ29RF7 1337 aaKnown RBP23.13■■□□□ 1.29
LHX3-202ENST00000371748 CCDC69A6NI79 296 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 AIFM3Q96NN9 605 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 FUCA2Q9BTY2 467 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 NUP62CLQ9H1M0 184 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 RNF41Q9H4P4 317 aaPredicted RBP23.13■■□□□ 1.29
LHX3-202ENST00000371748 CCDC88AQ3V6T2 1871 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 CYP2D7A0A087X1C5 515 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 ZNF396Q96N95 335 aaPredicted RBP23.13■■□□□ 1.29
LHX3-202ENST00000371748 RCOR1Q9UKL0 485 aa23.13■■□□□ 1.29
LHX3-202ENST00000371748 SERPINB2P05120 415 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 ZMYND15Q9H091 742 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 FAM217BQ9NTX9 383 aaPredicted RBP23.12■■□□□ 1.29
LHX3-202ENST00000371748 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
LHX3-202ENST00000371748 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 NR1I2O75469 434 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 CDKL5O76039 1030 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
LHX3-202ENST00000371748 RPGRQ92834 1020 aaKnown RBP23.12■■□□□ 1.29
LHX3-202ENST00000371748 MYH2Q9UKX2 1941 aa23.12■■□□□ 1.29
LHX3-202ENST00000371748 POLR3DP05423 398 aaPredicted RBP23.11■■□□□ 1.29
LHX3-202ENST00000371748 WTAPQ15007 396 aa23.11■■□□□ 1.29
LHX3-202ENST00000371748 NTRK3Q16288 839 aa23.11■■□□□ 1.29
LHX3-202ENST00000371748 GPR101Q96P66 508 aaPredicted RBP23.11■■□□□ 1.29
LHX3-202ENST00000371748 ANAPC4Q9UJX5 808 aa23.11■■□□□ 1.29
LHX3-202ENST00000371748 SART3Q15020 963 aaKnown RBP23.11■■□□□ 1.29
LHX3-202ENST00000371748 CPLX2Q6PUV4 134 aaKnown RBP23.11■■□□□ 1.29
LHX3-202ENST00000371748 ALG1Q9BT22 464 aa23.11■■□□□ 1.29
LHX3-202ENST00000371748 KIF28PB7ZC32 967 aa23.1■■□□□ 1.29
LHX3-202ENST00000371748 RANBP6O60518 1105 aaKnown RBP23.1■■□□□ 1.29
LHX3-202ENST00000371748 ST5P78524 1137 aa23.1■■□□□ 1.29
LHX3-202ENST00000371748 ATL3Q6DD88 541 aa23.1■■□□□ 1.29
LHX3-202ENST00000371748 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
LHX3-202ENST00000371748 MAST2Q6P0Q8 1798 aa23.1■■□□□ 1.29
LHX3-202ENST00000371748 ERICH2A1L162 156 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 LEMD3Q9Y2U8 911 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 XDHP47989 1333 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 IARSP41252 1262 aaKnown RBP23.09■■□□□ 1.29
LHX3-202ENST00000371748 MAP3K11Q16584 847 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 SYNE3Q6ZMZ3 975 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 TNMDQ9H2S6 317 aa23.09■■□□□ 1.29
LHX3-202ENST00000371748 DDX19AQ9NUU7 478 aaKnown RBP23.09■■□□□ 1.29
LHX3-202ENST00000371748 UBE2Q2LH0YL09 131 aa23.08■■□□□ 1.29
LHX3-202ENST00000371748 CKAP2LQ8IYA6 745 aa23.08■■□□□ 1.29
LHX3-202ENST00000371748 PROM2Q8N271 834 aa23.08■■□□□ 1.29
LHX3-202ENST00000371748 RBM10P98175 930 aaKnown RBP23.08■■□□□ 1.29
LHX3-202ENST00000371748 CTR9Q6PD62 1173 aa23.08■■□□□ 1.29
LHX3-202ENST00000371748 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.28
LHX3-202ENST00000371748 KIF23Q02241 960 aaPredicted RBP23.07■■□□□ 1.28
LHX3-202ENST00000371748 EVX2Q03828 476 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 DDR1Q08345 913 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 CRY2Q49AN0 593 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 ESR2Q92731 530 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 UBAC1Q9BSL1 405 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 CLSTN2Q9H4D0 955 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 USP17L12C9JPN9 530 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 USP17L21D6R901 530 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 PRDM1O75626 825 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 GPSM2P81274 684 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 SLC26A6Q9BXS9 759 aa23.07■■□□□ 1.28
LHX3-202ENST00000371748 MYSM1Q5VVJ2 828 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 DZIP1Q86YF9 867 aaKnown RBP23.06■■□□□ 1.28
LHX3-202ENST00000371748 CCAR1Q8IX12 1150 aaKnown RBP23.06■■□□□ 1.28
LHX3-202ENST00000371748 CLIC4Q9Y696 253 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 UQCRHLA0A096LP55 91 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 UQCRHP07919 91 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 CCDC192P0DO97 292 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 ME1P48163 572 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 KRT40Q6A162 431 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 BRAPQ7Z569 592 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 CRNKL1Q9BZJ0 848 aaKnown RBP23.06■■□□□ 1.28
LHX3-202ENST00000371748 RTEL1Q9NZ71 1219 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 TNKSO95271 1327 aa23.06■■□□□ 1.28
LHX3-202ENST00000371748 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 GOLPH3LQ9H4A5 285 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 DCP1AQ9NPI6 582 aaPredicted RBP23.05■■□□□ 1.28
LHX3-202ENST00000371748 NID2Q14112 1375 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 SSRP1Q08945 709 aaKnown RBP23.05■■□□□ 1.28
LHX3-202ENST00000371748 RTN1Q16799 776 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 TDRD7Q8NHU6 1098 aaKnown RBP23.05■■□□□ 1.28
LHX3-202ENST00000371748 NUP133Q8WUM0 1156 aa23.05■■□□□ 1.28
LHX3-202ENST00000371748 SEC23AQ15436 765 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 UVSSAQ2YD98 709 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 SPTY2D1Q68D10 685 aaPredicted RBP23.04■■□□□ 1.28
LHX3-202ENST00000371748 ZNF654Q8IZM8 581 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 TMTC2Q8N394 836 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 RBM17Q96I25 401 aaKnown RBP23.04■■□□□ 1.28
LHX3-202ENST00000371748 LAMB1P07942 1786 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 POLRMTO00411 1230 aaKnown RBP23.04■■□□□ 1.28
LHX3-202ENST00000371748 ZNF804AQ7Z570 1209 aa23.04■■□□□ 1.28
LHX3-202ENST00000371748 CMTR1Q8N1G2 835 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms