RNA–Protein interactions for RNA: ENST00000371388.4

RHOXF2-201, Transcript of Rhox homeobox family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF2, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2-201ENST00000371388 KRT40Q6A162 431 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ATL3Q6DD88 541 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 CCDC73Q6ZRK6 1079 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 PRDM1O75626 825 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 PRDX5P30044 214 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ANKRD2Q9GZV1 360 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ERICH2A1L162 156 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 MECOMQ03112 1051 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 EVX2Q03828 476 aa13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 SART3Q15020 963 aaKnown RBP13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.5□□□□□ -0.25
RHOXF2-201ENST00000371388 ZNF831Q5JPB2 1677 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 A0A087WWV3 80 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
RHOXF2-201ENST00000371388 GUCY1A2P33402 732 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 USP17L21D6R901 530 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 SPTLC2O15270 562 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 RTN1Q16799 776 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 ENGASEQ8NFI3 743 aa13.48□□□□□ -0.25
RHOXF2-201ENST00000371388 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 TRIM29Q14134 588 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 ADALQ6DHV7 355 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 ESR2Q92731 530 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 FBXW7Q969H0 707 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 TNKSO95271 1327 aa13.47□□□□□ -0.25
RHOXF2-201ENST00000371388 SEMA3EO15041 775 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 NDUFA8P51970 172 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 ZNF654Q8IZM8 581 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 NAP1L5Q96NT1 182 aaPredicted RBP13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 NHSQ6T4R5 1651 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 YEATS4O95619 227 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 IFNAR1P17181 557 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 ZNF165P49910 485 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
RHOXF2-201ENST00000371388 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 CYP2D6P10635 497 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 GRAPQ13588 217 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 PRR5LQ6MZQ0 368 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 FANCBQ8NB91 859 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 SDF4Q9BRK5 362 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 ANAPC4Q9UJX5 808 aa13.46□□□□□ -0.26
RHOXF2-201ENST00000371388 ONECUT3O60422 494 aaPredicted RBP13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 FMR1NBQ8N0W7 255 aaPredicted RBP13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 TMTC2Q8N394 836 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 SEC23AQ15436 765 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 ENAHQ8N8S7 591 aaPredicted RBP13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
RHOXF2-201ENST00000371388 BTBD18B2RXH4 712 aa13.44□□□□□ -0.26
RHOXF2-201ENST00000371388 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
RHOXF2-201ENST00000371388 TRIM37O94972 964 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms