RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GRIN2DO15399 1336 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 CDHR2Q9BYE9 1310 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 PHRF1Q9P1Y6 1649 aaKnown RBP13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 NEURL1BA8MQ27 555 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 FECHP22830 423 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 KBTBD3Q8NAB2 608 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
SMARCA1-201ENST00000371121 A0A1B0GTH6 734 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 BTBD11A6QL63 1104 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 RNF40O75150 1001 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 RBL2Q08999 1139 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 SENP2Q9HC62 589 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 ERVK-24P63145 666 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 ZMYM1Q5SVZ6 1142 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 WDR93Q6P2C0 686 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 TADA2BQ86TJ2 420 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 SLC35F6Q8N357 371 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
SMARCA1-201ENST00000371121 ACRBPQ8NEB7 543 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 HPCAL4Q9UM19 191 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 MYH13Q9UKX3 1938 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 CBFA2T2O43439 604 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 PDILTQ8N807 584 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 MYH7P12883 1935 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 GOLGA6L9A6NEM1 432 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 FXR1P51114 621 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 GCKRQ14397 625 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
SMARCA1-201ENST00000371121 GYPCP04921 128 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 MORC3Q14149 939 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 PANX2Q96RD6 677 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 TRIM10Q9UDY6 481 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 A1BGP04217 495 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 CASP7P55210 303 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 MST1RQ04912 1400 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 EFCAB13Q8IY85 973 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
SMARCA1-201ENST00000371121 PPP6R2O75170 966 aa13.33□□□□□ -0.27
SMARCA1-201ENST00000371121 LTKP29376 864 aa13.33□□□□□ -0.27
SMARCA1-201ENST00000371121 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.27
SMARCA1-201ENST00000371121 MMS22LQ6ZRQ5 1243 aa13.33□□□□□ -0.27
SMARCA1-201ENST00000371121 RAI14Q9P0K7 980 aa13.33□□□□□ -0.27
SMARCA1-201ENST00000371121 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 ATG9AQ7Z3C6 839 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 VPS37DQ86XT2 251 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 DPYDQ12882 1025 aa13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 AIMP1Q12904 312 aaKnown RBP13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 GSPT2Q8IYD1 628 aaKnown RBP13.33□□□□□ -0.28
SMARCA1-201ENST00000371121 GOLIM4O00461 696 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 MCTP2Q6DN12 878 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 HDAC6Q9UBN7 1215 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 A0A087X0B3 334 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 CCDC175P0C221 793 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 CDC25AP30304 524 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 NLRP6P59044 892 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 FNTAP49354 379 aa13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 ENOX1Q8TC92 643 aaKnown RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
SMARCA1-201ENST00000371121 MYO1BO43795 1136 aa13.31□□□□□ -0.28
SMARCA1-201ENST00000371121 NRDCO43847 1150 aa13.31□□□□□ -0.28
SMARCA1-201ENST00000371121 GGCXP38435 758 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms