RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 RGS3P49796 1198 aa13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 PRKCZQ05513 592 aa13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 RASGRF1Q13972 1273 aa13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 GABRQQ9UN88 632 aa13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
EXOSC1-204ENST00000370902 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 KIF22Q14807 665 aa13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 USP40Q9NVE5 1235 aa13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 AFG3L2Q9Y4W6 797 aa13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-204ENST00000370902 CXCL11O14625 94 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 SEMA3EO15041 775 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 ENTPD3O75355 529 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 PTPRAP18433 802 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 GRK4P32298 578 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 GJA8P48165 433 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 RHBDL3P58872 404 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 MEIS3Q99687 375 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
EXOSC1-204ENST00000370902 GJB1P08034 283 aa13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 CCL5P13501 91 aa13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-204ENST00000370902 MROH7-TTC4A0A0A0MT08 1334 aa13.76□□□□□ -0.21
EXOSC1-204ENST00000370902 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
EXOSC1-204ENST00000370902 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
EXOSC1-204ENST00000370902 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-204ENST00000370902 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-204ENST00000370902 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 TIMM10P62072 90 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 MTX1Q13505 466 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 RAET1EQ8TD07 263 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
EXOSC1-204ENST00000370902 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 BTDP43251 543 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 FCGRTP55899 365 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 TREML2Q5T2D2 321 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
EXOSC1-204ENST00000370902 GPR75-ASB3A0A0A6YYF3 556 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 FAM196BA6NMK8 535 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 ELNP15502 786 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 FLT3LGP49771 235 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 MECOMQ03112 1051 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 TFCP2Q12800 502 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 PAK6Q9NQU5 681 aaPredicted RBP13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
EXOSC1-204ENST00000370902 CTNND1O60716 968 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 INHAP05111 366 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 HOXD10P28358 340 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 PICALMQ13492 652 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 IRF5Q13568 498 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 ZGPATQ8N5A5 531 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
EXOSC1-204ENST00000370902 TRIM75PA6NK02 468 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 ZBTB7BO15156 539 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 ADCY3O60266 1144 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 TBC1D12O60347 775 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 FARP2O94887 1054 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 SGPL1O95470 568 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 ARID4AP29374 1257 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 ABCF2Q9UG63 623 aa13.71□□□□□ -0.21
EXOSC1-204ENST00000370902 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-204ENST00000370902 UBXN2AP68543 259 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms