RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 MCM6Q14566 821 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 PPARDQ03181 441 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 LEO1Q8WVC0 666 aaPredicted RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 ARHGEF35A5YM69 484 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 E7EVH7 732 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 GPAA1O43292 621 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 STX10O60499 249 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 DNAJC21Q5F1R6 531 aaKnown RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 LMBR1Q8WVP7 490 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 IFNKQ9P0W0 207 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 SOS1Q07889 1333 aaPredicted RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 FRMPD2Q68DX3 1309 aaPredicted RBP9.6□□□□□ -0.87
ABCA4-201ENST00000370225 SLC8A3P57103 927 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 GEN1Q17RS7 908 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 CFAP58Q5T655 872 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 C6orf163Q5TEZ5 329 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 FAM227BQ96M60 508 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 FAM182BQ5T319 152 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 SPATA5Q8NB90 893 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 FBF1Q8TES7 1133 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 PHKBQ93100 1093 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 CLSTN2Q9H4D0 955 aa9.6□□□□□ -0.87
ABCA4-201ENST00000370225 M0QZ92 97 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CHMLP26374 656 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 SPAG1Q07617 926 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 GOLGA1Q92805 767 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 NOC4LQ9BVI4 516 aaKnown RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 KCNK9Q9NPC2 374 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 GAS8O95995 478 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 TYRO3Q06418 890 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 BIRC2Q13490 618 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CARD14Q9BXL6 1004 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 TLDC2A0PJX2 215 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 OTUD7BQ6GQQ9 843 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 WDR66Q8TBY9 1149 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 OTUD7AQ8TE49 926 aaPredicted RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 VPS16Q9H269 839 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 MAST3O60307 1309 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 PLEKHM2Q8IWE5 1019 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 IQUBQ8NA54 791 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CTTNBP2Q8WZ74 1663 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 RHOXF2Q9BQY4 288 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CRCPO75575 148 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 ABL1P00519 1130 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 ZBTB16Q05516 673 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CMTR1Q8N1G2 835 aaKnown RBP9.59□□□□□ -0.87
ABCA4-201ENST00000370225 MYCT1Q8N699 235 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 CSADQ9Y600 493 aa9.59□□□□□ -0.87
ABCA4-201ENST00000370225 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 LPXNO60711 386 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 ALDH1B1P30837 517 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 SUPT20HQ8NEM7 779 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 DDX12PQ92771 950 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 ZNF532Q9HCE3 1301 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 ERCC5P28715 1186 aaPredicted RBP9.58□□□□□ -0.88
ABCA4-201ENST00000370225 ZAP70P43403 619 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 KRT83P78385 493 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 SLC27A2O14975 620 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 CCDC6Q16204 474 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 KIFAP3Q92845 792 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 TESPA1A2RU30 521 aaPredicted RBP9.58□□□□□ -0.88
ABCA4-201ENST00000370225 KRT86O43790 486 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 ADCY7P51828 1080 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
ABCA4-201ENST00000370225 KLHL40Q2TBA0 621 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 GCNT3O95395 438 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 MAP7D1Q3KQU3 841 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 CCDC77Q9BR77 488 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 SPOPO43791 374 aa9.58□□□□□ -0.88
ABCA4-201ENST00000370225 USP19O94966 1318 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 CALUO43852 315 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-201ENST00000370225 KMT5BQ4FZB7 885 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 SEL1L2Q5TEA6 688 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 NELFCDQ8IXH7 590 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 TNFAIP3P21580 790 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
ABCA4-201ENST00000370225 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-201ENST00000370225 ATRIPQ8WXE1 791 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms