RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 VPS16Q9H269 839 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 GABPAQ06546 454 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 MAP7Q14244 749 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 BIRC3Q13489 604 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 TNFAIP3P21580 790 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 SMTNP53814 917 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 SP4Q02446 784 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 DENND2CQ68D51 928 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 PDCD7Q8N8D1 485 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 CXorf38Q8TB03 319 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 PPARDQ03181 441 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 MIER3Q7Z3K6 550 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 RNF34Q969K3 372 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 CUL4BQ13620 913 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 WHAMMP3Q1A5X7 153 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 MIGA1Q8NAN2 632 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.88□□□□□ -0.192e-20■■□□□ 12
HCFC1-202ENST00000369984 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 ZNF365Q70YC5 407 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 BACH1O14867 736 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 POLR2DO15514 142 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
HCFC1-202ENST00000369984 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 LIN9Q5TKA1 542 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 RABEP2Q9H5N1 569 aa13.88□□□□□ -0.19
HCFC1-202ENST00000369984 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 ZC4H2Q9NQZ6 224 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 ANKRD36BQ8N2N9 1353 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 ZNF174Q15697 407 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 TRIM31Q9BZY9 425 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 PPP1R2P41236 205 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 PPP2R5CQ13362 524 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 RNF113AO15541 343 aaKnown RBP13.87□□□□□ -0.19
HCFC1-202ENST00000369984 PLCG2P16885 1265 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
HCFC1-202ENST00000369984 TPX2Q9ULW0 747 aaKnown RBP13.87□□□□□ -0.19
HCFC1-202ENST00000369984 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
HCFC1-202ENST00000369984 ZBTB17Q13105 803 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 GCKP35557 465 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 ELF2Q15723 593 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 CASC4Q6P4E1 433 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 TBC1D8O95759 1140 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 PLCD1P51178 756 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 TRPC3Q13507 836 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 VEZTQ9HBM0 779 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 VSIG1Q86XK7 387 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 COG7P83436 770 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 LETM2Q2VYF4 491 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 HHATQ5VTY9 493 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.191e-8■□□□□ 9.3
HCFC1-202ENST00000369984 HARSP12081 509 aaKnown RBP13.86□□□□□ -0.19
HCFC1-202ENST00000369984 ATP8B2P98198 1209 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 ASIC3Q9UHC3 531 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 PDE4DQ08499 809 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 RILPQ96NA2 401 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
HCFC1-202ENST00000369984 ATICP31939 592 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 RASSF2P50749 326 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 C8orf34Q49A92 452 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 CCDC38Q502W7 563 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 RILPL1Q5EBL4 403 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 NUP58Q9BVL2 599 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 NYXQ9GZU5 481 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 IMPACTQ9P2X3 320 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
HCFC1-202ENST00000369984 STK38LQ9Y2H1 464 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
HCFC1-202ENST00000369984 NOS1P29475 1434 aa13.85□□□□□ -0.19
HCFC1-202ENST00000369984 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
HCFC1-202ENST00000369984 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 ATP2A3Q93084 1043 aa13.84□□□□□ -0.19
HCFC1-202ENST00000369984 RBSNQ9H1K0 784 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms