RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
CSDE1-204ENST00000369530 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 SKAP1Q86WV1 359 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 PTPN18Q99952 460 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 CHMP5Q9NZZ3 219 aa8.27□□□□□ -1.09
CSDE1-204ENST00000369530 PA2G4Q9UQ80 394 aaKnown RBP8.27□□□□□ -1.09
CSDE1-204ENST00000369530 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 NKX2-3Q8TAU0 364 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 PANK1Q8TE04 598 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 PHKA1P46020 1223 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 VEGFBP49765 207 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 IFIT5Q13325 482 aaKnown RBP8.26□□□□□ -1.09
CSDE1-204ENST00000369530 GAS2L3Q86XJ1 694 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 TBC1D32Q96NH3 1257 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 ZCCHC17Q9NP64 241 aaKnown RBP8.26□□□□□ -1.09
CSDE1-204ENST00000369530 PRDM10Q9NQV6 1147 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 IRF6O14896 467 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 HSPA8P11142 646 aaKnown RBP8.26□□□□□ -1.09
CSDE1-204ENST00000369530 CTGFP29279 349 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 TFCP2Q12800 502 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 CDCA5Q96FF9 252 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
CSDE1-204ENST00000369530 BCAMP50895 628 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-204ENST00000369530 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 NIM1KQ8IY84 436 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 DZIP1LQ8IYY4 767 aaKnown RBP8.25□□□□□ -1.09
CSDE1-204ENST00000369530 DAGLAQ9Y4D2 1042 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 SNCAIPQ9Y6H5 919 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 TMEM88BA6NKF7 163 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 GYG1P46976 350 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 NEXNQ0ZGT2 675 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 ZFPM1Q8IX07 1006 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 CEP120Q8N960 986 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 FEZ1Q99689 392 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 MUC3AQ02505 3323 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 MROH7-TTC4A0A0A0MT08 1334 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 SH3D19Q5HYK7 790 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
CSDE1-204ENST00000369530 NBPF3Q9H094 633 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-204ENST00000369530 ZKSCAN5Q9Y2L8 839 aa8.25□□□□□ -1.09
CSDE1-204ENST00000369530 GNAI3P08754 354 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 KIF4BQ2VIQ3 1234 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 RPAP2Q8IXW5 612 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-204ENST00000369530 GBF1Q92538 1859 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 VGLL3A8MV65 326 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 ADM5C9JUS6 153 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 MSNP26038 577 aaKnown RBP8.24□□□□□ -1.09
CSDE1-204ENST00000369530 MAP2K2P36507 400 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 ZNF445P59923 1031 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 ADAMTS5Q9UNA0 930 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 GNAI2P04899 355 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 ANKRD7Q92527 254 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 XAGE2Q96GT9 111 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 PIH1D3Q9NQM4 214 aaKnown RBP8.24□□□□□ -1.09
CSDE1-204ENST00000369530 ZNF70Q9UC06 446 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-204ENST00000369530 SLC45A1Q9Y2W3 748 aa8.24□□□□□ -1.09
CSDE1-204ENST00000369530 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
CSDE1-204ENST00000369530 CDC42EP5Q6NZY7 148 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 LBX2Q6XYB7 198 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 A0A1B0GUL7 405 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 RAD17O75943 681 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 PLCD3Q8N3E9 789 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 HAUS7Q99871 368 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 EHD4Q9H223 541 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 ATP5JP18859 108 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 ATP2B3Q16720 1220 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 LARGE2Q8N3Y3 721 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 USP6NLQ92738 828 aa8.23□□□□□ -1.09
CSDE1-204ENST00000369530 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
CSDE1-204ENST00000369530 SYCP1Q15431 976 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 ITPRIPQ8IWB1 547 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 GLIS2Q9BZE0 524 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-204ENST00000369530 ARID2Q68CP9 1835 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 HTRA3P83110 453 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 EVX2Q03828 476 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 HIBADHP31937 336 aaKnown RBP8.22□□□□□ -1.09
CSDE1-204ENST00000369530 DNTTIP2Q5QJE6 756 aaKnown RBP8.22□□□□□ -1.09
CSDE1-204ENST00000369530 KCNG1Q9UIX4 513 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
CSDE1-204ENST00000369530 DOCK3Q8IZD9 2030 aa8.22□□□□□ -1.09
CSDE1-204ENST00000369530 NID2Q14112 1375 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 PRDX5P30044 214 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 CRKP46108 304 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 LDHAL6AQ6ZMR3 332 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 CSRNP1Q96S65 589 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 AFG3L2Q9Y4W6 797 aa8.21□□□□□ -1.09
CSDE1-204ENST00000369530 ENTPD3O75355 529 aa8.21□□□□□ -1.1
CSDE1-204ENST00000369530 ZBTB48P10074 688 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-204ENST00000369530 CDC37L1Q7L3B6 337 aa8.21□□□□□ -1.1
CSDE1-204ENST00000369530 R3HDMLQ9H3Y0 253 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms