RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 SMTNP53814 917 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 KRT23Q9C075 422 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 CALM1P0DP23 149 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 CALM2P0DP24 149 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 CALM3P0DP25 149 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 PLCB3Q01970 1234 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
VANGL1-204ENST00000369510 GGNBP2Q9H3C7 697 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 ZEB2O60315 1214 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 GNG11P61952 73 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 C16orf87Q6PH81 154 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 DBNLQ9UJU6 430 aaKnown RBP9.64□□□□□ -0.87
VANGL1-204ENST00000369510 MIS18AQ9NYP9 233 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 PYGBP11216 843 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 JADE1Q6IE81 842 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 EXOC1Q9NV70 894 aa9.64□□□□□ -0.87
VANGL1-204ENST00000369510 NDUFA5Q16718 116 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TSR2Q969E8 191 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 MRPL40Q9NQ50 206 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 CALML3P27482 149 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 C20orf194Q5TEA3 1177 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 HHATQ5VTY9 493 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 NME8Q8N427 588 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 NOX5Q96PH1 765 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 NBPF3Q9H094 633 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 ARHGAP26Q9UNA1 814 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 ANKRD50Q9ULJ7 1429 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TEX28O15482 410 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 PHACTR2O75167 634 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 PHF21AQ96BD5 680 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 SH3GL3Q99963 347 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 ZNF212Q9UDV6 495 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 CCDC194A0A1B0GVG4 234 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 MEIS1O00470 390 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 SLC4A1P02730 911 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TCERG1LQ5VWI1 586 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 POTEEQ6S8J3 1075 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 IQCDQ96DY2 449 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 MTBPQ96DY7 904 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 KLHL14Q9P2G3 628 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TLK1Q9UKI8 766 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TTI1O43156 1089 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 ARHGDIAP52565 204 aa9.63□□□□□ -0.87
VANGL1-204ENST00000369510 TTF1Q15361 905 aaPredicted RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
VANGL1-204ENST00000369510 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 PLEKHM3Q6ZWE6 761 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 GMEB1Q9Y692 573 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 NOP56O00567 594 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 CEP85Q6P2H3 762 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 CPLX3Q8WVH0 158 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 QKIQ96PU8 341 aaKnown RBP eCLIP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 ABCF3Q9NUQ8 709 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 FRMD3A2A2Y4 597 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 RASSF7Q02833 373 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 NR5A1Q13285 461 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 TMED1Q13445 227 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 ZGPATQ8N5A5 531 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 CNNM3Q8NE01 707 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 PIGUQ9H490 435 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 TLK2Q86UE8 772 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 LZICQ8WZA0 190 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 OTUB1Q96FW1 271 aaPredicted RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 C10orf88Q9H8K7 445 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 HORMAD1Q86X24 394 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 FGD6Q6ZV73 1430 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 MMEP08473 750 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 TSC22D1Q15714 1073 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 ATAD3BQ5T9A4 648 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 PACSIN2Q9UNF0 486 aaPredicted RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 TTC25Q96NG3 672 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 TTC1Q99614 292 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 SYTL2Q9HCH5 934 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 CNNM1Q9NRU3 951 aa9.62□□□□□ -0.87
VANGL1-204ENST00000369510 CHCHD3Q9NX63 227 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 STX18Q9P2W9 335 aaKnown RBP9.62□□□□□ -0.87
VANGL1-204ENST00000369510 ANKLE2Q86XL3 938 aa9.61□□□□□ -0.87
VANGL1-204ENST00000369510 ARHGAP18Q8N392 663 aa9.61□□□□□ -0.87
VANGL1-204ENST00000369510 TCF3P15923 654 aa9.61□□□□□ -0.87
VANGL1-204ENST00000369510 KPNA2P52292 529 aaKnown RBP9.61□□□□□ -0.87
VANGL1-204ENST00000369510 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
VANGL1-204ENST00000369510 EFCAB13Q8IY85 973 aa9.61□□□□□ -0.87
VANGL1-204ENST00000369510 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms