RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 LRRC8AQ8IWT6 810 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 PRIMPOLQ96LW4 560 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 ERICH2A1L162 156 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
RAB39B-201ENST00000369454 NR5A1Q13285 461 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 EVX2Q03828 476 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 NTRK3Q16288 839 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 SHC4Q6S5L8 630 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 ZNF512BQ96KM6 892 aaPredicted RBP13.31□□□□□ -0.28
RAB39B-201ENST00000369454 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 SLIT2O94813 1529 aa13.31□□□□□ -0.28
RAB39B-201ENST00000369454 FOXN1O15353 648 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 GRIN1Q05586 938 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
RAB39B-201ENST00000369454 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 CAVIN2O95810 425 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
RAB39B-201ENST00000369454 RTN1Q16799 776 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
RAB39B-201ENST00000369454 UBAC1Q9BSL1 405 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 NTSR2O95665 410 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
RAB39B-201ENST00000369454 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
RAB39B-201ENST00000369454 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
RAB39B-201ENST00000369454 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
RAB39B-201ENST00000369454 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
RAB39B-201ENST00000369454 NUP98P52948 1817 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
RAB39B-201ENST00000369454 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 NPHP1O15259 732 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 CMA1P23946 247 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 KLRK1P26718 216 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 MTMR7Q9Y216 660 aa13.29□□□□□ -0.28
RAB39B-201ENST00000369454 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 PPARAQ07869 468 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 GOLGA8FQ08AF8 430 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 GOLGA8DPQ0D2H9 430 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB39B-201ENST00000369454 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 CNNM3Q8NE01 707 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
RAB39B-201ENST00000369454 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 KRT23Q9C075 422 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 LRP6O75581 1613 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
RAB39B-201ENST00000369454 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB39B-201ENST00000369454 V9GYY5 206 aaPredicted RBP13.28□□□□□ -0.28
RAB39B-201ENST00000369454 FAM205CA6NFA0 338 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 CABP5Q9NP86 173 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.27□□□□□ -0.28
RAB39B-201ENST00000369454 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 PTPAQ15257 358 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 PARP10Q53GL7 1025 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 SARM1Q6SZW1 724 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 JMYQ8N9B5 988 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.28
RAB39B-201ENST00000369454 MYH7P12883 1935 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 TNKSO95271 1327 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 NLRP12P59046 1061 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 NBPF11Q86T75 865 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
RAB39B-201ENST00000369454 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
RAB39B-201ENST00000369454 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
RAB39B-201ENST00000369454 LIFRP42702 1097 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 SERPINC1P01008 464 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 MAP3K14Q99558 947 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 POLR2DO15514 142 aaKnown RBP13.26□□□□□ -0.29
RAB39B-201ENST00000369454 NMT2O60551 498 aa13.26□□□□□ -0.29
RAB39B-201ENST00000369454 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
RAB39B-201ENST00000369454 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
RAB39B-201ENST00000369454 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms