RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
SNX27-201ENST00000368838 HIP1O00291 1037 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 IL1R1P14778 569 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 GRIK5Q16478 980 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
SNX27-201ENST00000368838 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 AACSQ86V21 672 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
SNX27-201ENST00000368838 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 REC8O95072 547 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 PDE8BO95263 885 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 TFCP2Q12800 502 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
SNX27-201ENST00000368838 LRRC24Q50LG9 513 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 MFSD14BQ5SR56 506 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 LDLRAD1Q5T700 205 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 SPRYD7Q5W111 196 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 C15orf52Q6ZUT6 534 aaKnown RBP10.62□□□□□ -0.71
SNX27-201ENST00000368838 CDAN1Q8IWY9 1227 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 DBNLQ9UJU6 430 aaKnown RBP10.62□□□□□ -0.71
SNX27-201ENST00000368838 TTF2Q9UNY4 1162 aaKnown RBP10.62□□□□□ -0.71
SNX27-201ENST00000368838 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
SNX27-201ENST00000368838 GPR25O00155 361 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 MYO1BO43795 1136 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 FGFR2P21802 821 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 HIBADHP31937 336 aaKnown RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 TM4SF4P48230 202 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 RASA3Q14644 834 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 WNK4Q96J92 1243 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 FAM84BQ96KN1 310 aaPredicted RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 TDRD3Q9H7E2 651 aaKnown RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 RAD50Q92878 1312 aa10.61□□□□□ -0.71
SNX27-201ENST00000368838 KIAA0100Q14667 2235 aaKnown RBP10.61□□□□□ -0.71
SNX27-201ENST00000368838 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 APBB1O00213 710 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 SEC24BO95487 1268 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 CHMLP26374 656 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 CACNB3P54284 484 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 SREBF2Q12772 1141 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
SNX27-201ENST00000368838 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 HAUS7Q99871 368 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 FAM205AQ6ZU69 1335 aa10.6□□□□□ -0.71
SNX27-201ENST00000368838 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX27-201ENST00000368838 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
SNX27-201ENST00000368838 FKTNO75072 461 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 USP2O75604 605 aaPredicted RBP10.59□□□□□ -0.71
SNX27-201ENST00000368838 GJA5P36382 358 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
SNX27-201ENST00000368838 MMP14P50281 582 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX27-201ENST00000368838 ANAPC15P60006 121 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 UBE4AQ14139 1066 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 METTL24Q5JXM2 366 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 VPS37DQ86XT2 251 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 LPIN2Q92539 896 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 SIL1Q9H173 461 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
SNX27-201ENST00000368838 ZNF70Q9UC06 446 aaPredicted RBP10.59□□□□□ -0.71
SNX27-201ENST00000368838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.59□□□□□ -0.71
SNX27-201ENST00000368838 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 CRKP46108 304 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 BCAMP50895 628 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 FKBP1AP62942 108 aaKnown RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 CAMK2BQ13554 666 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 PUM3Q15397 648 aaKnown RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 CCDC158Q5M9N0 1113 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 ESYT1Q9BSJ8 1104 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 USP26Q9BXU7 913 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 TMEM39BQ9GZU3 492 aa10.58□□□□□ -0.71
SNX27-201ENST00000368838 ARIH1Q9Y4X5 557 aaPredicted RBP10.58□□□□□ -0.71
SNX27-201ENST00000368838 PDS5AQ29RF7 1337 aaKnown RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 CENPFP49454 3210 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 HAX1O00165 279 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 SGSM2O43147 1006 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 ARID4AP29374 1257 aaPredicted RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 IREB2P48200 963 aaKnown RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 MAP3K11Q16584 847 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 DBNDD2Q9BQY9 259 aa10.58□□□□□ -0.72
SNX27-201ENST00000368838 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
SNX27-201ENST00000368838 PPP2R3BQ9Y5P8 575 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms