RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NOL10Q9BSC4 688 aaKnown RBP27.25■■□□□ 1.95
ECHDC1-203ENST00000368291 SIPA1L1O43166 1804 aa27.25■■□□□ 1.95
ECHDC1-203ENST00000368291 MYH1P12882 1939 aa27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 TCRBV5S4A2TA0A5A2 114 aa27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 DDTLA6NHG4 134 aaPredicted RBP27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 UNCXA6NJT0 531 aa27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 PDE6AP16499 860 aa27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 TEX11Q8IYF3 940 aa27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.24■■□□□ 1.95
ECHDC1-203ENST00000368291 SLC9C2Q5TAH2 1124 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 MIGA2Q7L4E1 593 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 ANKRD13AQ8IZ07 590 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 MIGA1Q8NAN2 632 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 PI4K2BQ8TCG2 481 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 HOOK2Q96ED9 719 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 GPATCH3Q96I76 525 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 TTC41PQ6P2S7 1318 aa27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 COL2A1P02458 1487 aaPredicted RBP27.23■■□□□ 1.95
ECHDC1-203ENST00000368291 PLCG2P16885 1265 aa27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 KIF23Q02241 960 aaPredicted RBP27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 MAP2K1Q02750 393 aaPredicted RBP27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 SLFNL1Q499Z3 407 aa27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 DCAF15Q66K64 600 aa27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 SLC10A4Q96EP9 437 aa27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 CSRNP1Q96S65 589 aa27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 RIOK1Q9BRS2 568 aaKnown RBP27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 OSBPL5Q9H0X9 879 aaPredicted RBP27.22■■□□□ 1.95
ECHDC1-203ENST00000368291 ZNF532Q9HCE3 1301 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 CHGBP05060 677 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 MX1P20591 662 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 ADD2P35612 726 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 MAP3K9P80192 1104 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 SPRYD7Q5W111 196 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 TGFBRAP1Q8WUH2 860 aa27.21■■□□□ 1.95
ECHDC1-203ENST00000368291 SLURP2P0DP57 97 aa27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 MAP3K10Q02779 954 aa27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 VGLL4Q14135 290 aa27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 ZSCAN29Q8IWY8 852 aaPredicted RBP27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 ZNF341Q9BYN7 854 aa27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 ZNF112Q9UJU3 913 aa27.2■■□□□ 1.94
ECHDC1-203ENST00000368291 FOXN1O15353 648 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 GJA5P36382 358 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 B4GALNT3Q6L9W6 998 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 WNK4Q96J92 1243 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 WRNIP1Q96S55 665 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 LNPKQ9C0E8 428 aa27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 ZBTB47Q9UFB7 747 aaPredicted RBP27.19■■□□□ 1.94
ECHDC1-203ENST00000368291 DDX60LQ5H9U9 1706 aaKnown RBP27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 FLT1P17948 1338 aa27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 MKRN3Q13064 507 aaKnown RBP27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 MAPKAPK5Q8IW41 473 aa27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 ZKSCAN4Q969J2 545 aaPredicted RBP27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 ELP3Q9H9T3 547 aa27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 STAP2Q9UGK3 403 aa27.18■■□□□ 1.94
ECHDC1-203ENST00000368291 GLRX3O76003 335 aaKnown RBP27.17■■□□□ 1.94
ECHDC1-203ENST00000368291 INPP5BP32019 993 aa27.17■■□□□ 1.94
ECHDC1-203ENST00000368291 NUCB1Q02818 461 aa27.17■■□□□ 1.94
ECHDC1-203ENST00000368291 CERS3Q8IU89 383 aa27.17■■□□□ 1.94
ECHDC1-203ENST00000368291 SNCAIPQ9Y6H5 919 aa27.17■■□□□ 1.94
ECHDC1-203ENST00000368291 NAV1Q8NEY1 1877 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 MAGEB6P1A0A0J9YX57 407 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 PHF20L1A8MW92 1017 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 ERC2O15083 957 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 KBTBD3Q8NAB2 608 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 CNKSR2Q8WXI2 1034 aa27.16■■□□□ 1.94
ECHDC1-203ENST00000368291 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.16■■□□□ 1.945e-9■■■■■ 28.9
ECHDC1-203ENST00000368291 PDE1AP54750 535 aa27.15■■□□□ 1.94
ECHDC1-203ENST00000368291 UBE3CQ15386 1083 aa27.15■■□□□ 1.94
ECHDC1-203ENST00000368291 CHD1LQ86WJ1 897 aa27.15■■□□□ 1.94
ECHDC1-203ENST00000368291 CSADQ9Y600 493 aa27.15■■□□□ 1.94
ECHDC1-203ENST00000368291 DOCK1Q14185 1865 aa27.15■■□□□ 1.94
ECHDC1-203ENST00000368291 ATAD5Q96QE3 1844 aa27.14■■□□□ 1.94
ECHDC1-203ENST00000368291 ZBTB48P10074 688 aaPredicted RBP27.14■■□□□ 1.94
ECHDC1-203ENST00000368291 OPTNQ96CV9 577 aa27.14■■□□□ 1.94
ECHDC1-203ENST00000368291 BAZ2AQ9UIF9 1905 aaKnown RBP27.13■■□□□ 1.93
ECHDC1-203ENST00000368291 TBC1D12O60347 775 aa27.13■■□□□ 1.93
ECHDC1-203ENST00000368291 LCORLQ8N3X6 602 aa27.13■■□□□ 1.93
ECHDC1-203ENST00000368291 PHIPQ8WWQ0 1821 aa27.12■■□□□ 1.93
ECHDC1-203ENST00000368291 FAM196BA6NMK8 535 aa27.12■■□□□ 1.93
ECHDC1-203ENST00000368291 AIDAQ96BJ3 306 aa27.12■■□□□ 1.93
ECHDC1-203ENST00000368291 DHX36Q9H2U1 1008 aaKnown RBP27.12■■□□□ 1.93
ECHDC1-203ENST00000368291 PALD1Q9ULE6 856 aa27.12■■□□□ 1.93
ECHDC1-203ENST00000368291 SPDYE5A6NIY4 337 aa27.11■■□□□ 1.93
ECHDC1-203ENST00000368291 TM4SF4P48230 202 aa27.11■■□□□ 1.93
ECHDC1-203ENST00000368291 REM2Q8IYK8 340 aaPredicted RBP27.11■■□□□ 1.93
ECHDC1-203ENST00000368291 ARMT1Q9H993 441 aa27.11■■□□□ 1.93
ECHDC1-203ENST00000368291 SAP30BPQ9UHR5 308 aaKnown RBP27.11■■□□□ 1.93
ECHDC1-203ENST00000368291 USP5P45974 858 aa27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 NOL9Q5SY16 702 aaKnown RBP27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 ZSCAN25Q6NSZ9 544 aa27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 BEGAINQ9BUH8 593 aa27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 PUS7LQ9H0K6 701 aaKnown RBP27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 PI4KBQ9UBF8 816 aa27.1■■□□□ 1.93
ECHDC1-203ENST00000368291 HSPA8P11142 646 aaKnown RBP27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 METTL16Q86W50 562 aaKnown RBP27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 ERO1BQ86YB8 467 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 MBD4O95243 580 aa27.09■■□□□ 1.93
ECHDC1-203ENST00000368291 PLEKHM2Q8IWE5 1019 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms