RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
SNHG28-201ENST00000368102 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
SNHG28-201ENST00000368102 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
SNHG28-201ENST00000368102 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
SNHG28-201ENST00000368102 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
SNHG28-201ENST00000368102 CDC27P30260 824 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 RBM6P78332 1123 aaKnown RBP16.27■□□□□ 0.2
SNHG28-201ENST00000368102 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 ATL3Q6DD88 541 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 MICU3Q86XE3 530 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 CDC5LQ99459 802 aaKnown RBP16.27■□□□□ 0.2
SNHG28-201ENST00000368102 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.2
SNHG28-201ENST00000368102 BCL9LQ86UU0 1499 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
SNHG28-201ENST00000368102 CEP135Q66GS9 1140 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 NAPBQ9H115 298 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
SNHG28-201ENST00000368102 AFF2P51816 1311 aa16.27■□□□□ 0.19
SNHG28-201ENST00000368102 ARAP2Q8WZ64 1704 aa16.27■□□□□ 0.19
SNHG28-201ENST00000368102 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
SNHG28-201ENST00000368102 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
SNHG28-201ENST00000368102 SPTLC2O15270 562 aa16.26■□□□□ 0.19
SNHG28-201ENST00000368102 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
SNHG28-201ENST00000368102 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
SNHG28-201ENST00000368102 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
SNHG28-201ENST00000368102 ZNF771Q7L3S4 317 aaPredicted RBP16.26■□□□□ 0.19
SNHG28-201ENST00000368102 KIF18AQ8NI77 898 aa16.26■□□□□ 0.19
SNHG28-201ENST00000368102 IQSEC3Q9UPP2 1182 aaPredicted RBP16.26■□□□□ 0.19
SNHG28-201ENST00000368102 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
SNHG28-201ENST00000368102 GSG1L2A8MUP6 293 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 PRKAB2O43741 272 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 NBPF11Q86T75 865 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 ZNF397Q8NF99 534 aaPredicted RBP16.25■□□□□ 0.19
SNHG28-201ENST00000368102 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 WTIPA6NIX2 430 aaPredicted RBP16.25■□□□□ 0.19
SNHG28-201ENST00000368102 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 LCORLQ8N3X6 602 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 COL4A1P02462 1669 aa16.25■□□□□ 0.19
SNHG28-201ENST00000368102 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 CTAGE5O15320 804 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 METAP2P50579 478 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNHG28-201ENST00000368102 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
SNHG28-201ENST00000368102 VPS72Q15906 364 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 CLIC6Q96NY7 704 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 SKILP12757 684 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 PFKFB1P16118 471 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
SNHG28-201ENST00000368102 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 KIAA1468Q9P260 1216 aa16.24■□□□□ 0.19
SNHG28-201ENST00000368102 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 ZNF202O95125 648 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 GYG1P46976 350 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 CCZ1BP86790 482 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 CCZ1P86791 482 aaPredicted RBP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 SPECC1Q5M775 1068 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 TBC1D9BQ66K14 1250 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 SLC4A4Q9Y6R1 1079 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 V9GYY5 206 aaPredicted RBP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
SNHG28-201ENST00000368102 TMEM67Q5HYA8 995 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 KRT222Q8N1A0 295 aa16.23■□□□□ 0.19
SNHG28-201ENST00000368102 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 GNAT2P19087 354 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 TDO2P48775 406 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 FAM193AP78312 1265 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 CNTNAP4Q9C0A0 1308 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 LY9Q9HBG7 655 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
SNHG28-201ENST00000368102 ABCF2Q9UG63 623 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 ZNF804BA4D1E1 1349 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 KIF2AO00139 706 aaPredicted RBP16.22■□□□□ 0.19
SNHG28-201ENST00000368102 AKNAD1Q5T1N1 836 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
SNHG28-201ENST00000368102 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms