RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 TBC1D22AQ8WUA7 517 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 DNAAF4Q8WXU2 420 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 COA7Q96BR5 231 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 MRIQ9BWK5 157 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 SLC45A1Q9Y2W3 748 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
VAMP4-202ENST00000367740 FRMPD3Q5JV73 1810 aa18.63■□□□□ 0.57
VAMP4-202ENST00000367740 MDM2Q00987 491 aaPredicted RBP18.63■□□□□ 0.57
VAMP4-202ENST00000367740 CCDC57Q2TAC2 916 aa18.63■□□□□ 0.57
VAMP4-202ENST00000367740 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
VAMP4-202ENST00000367740 GADL1Q6ZQY3 521 aa18.63■□□□□ 0.57
VAMP4-202ENST00000367740 FASTKD5Q7L8L6 764 aaKnown RBP18.63■□□□□ 0.57
VAMP4-202ENST00000367740 MAFAQ8NHW3 353 aaPredicted RBP18.63■□□□□ 0.57
VAMP4-202ENST00000367740 SMCR8Q8TEV9 937 aaPredicted RBP18.63■□□□□ 0.57
VAMP4-202ENST00000367740 FLIIQ13045 1269 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 ZNF697Q5TEC3 545 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
VAMP4-202ENST00000367740 ATRNL1Q5VV63 1379 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 LOC285556D6RIA3 1793 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 LTBP2Q14767 1821 aa18.62■□□□□ 0.57
VAMP4-202ENST00000367740 MAST3O60307 1309 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 TCP10Q12799 353 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 CDX2Q99626 313 aaPredicted RBP18.61■□□□□ 0.57
VAMP4-202ENST00000367740 ZHX2Q9Y6X8 837 aa18.61■□□□□ 0.57
VAMP4-202ENST00000367740 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
VAMP4-202ENST00000367740 COL6A1P12109 1028 aa18.6■□□□□ 0.57
VAMP4-202ENST00000367740 NFIAQ12857 509 aa18.6■□□□□ 0.57
VAMP4-202ENST00000367740 FAM110CQ1W6H9 321 aa18.6■□□□□ 0.57
VAMP4-202ENST00000367740 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
VAMP4-202ENST00000367740 PUS3Q9BZE2 481 aaKnown RBP18.6■□□□□ 0.57
VAMP4-202ENST00000367740 AFG3L2Q9Y4W6 797 aa18.6■□□□□ 0.57
VAMP4-202ENST00000367740 PTPRAP18433 802 aa18.59■□□□□ 0.57
VAMP4-202ENST00000367740 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
VAMP4-202ENST00000367740 LRRC26Q2I0M4 334 aa18.59■□□□□ 0.57
VAMP4-202ENST00000367740 SCYL3Q8IZE3 742 aa18.59■□□□□ 0.57
VAMP4-202ENST00000367740 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
VAMP4-202ENST00000367740 RAPGEFL1Q9UHV5 662 aa18.59■□□□□ 0.57
VAMP4-202ENST00000367740 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
VAMP4-202ENST00000367740 APAF1O14727 1248 aa18.58■□□□□ 0.56
VAMP4-202ENST00000367740 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.56
VAMP4-202ENST00000367740 TRIB2Q92519 343 aa18.58■□□□□ 0.56
VAMP4-202ENST00000367740 FAM198AQ9UFP1 575 aa18.58■□□□□ 0.56
VAMP4-202ENST00000367740 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
VAMP4-202ENST00000367740 CDC42EP5Q6NZY7 148 aa18.57■□□□□ 0.56
VAMP4-202ENST00000367740 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
VAMP4-202ENST00000367740 PICK1Q9NRD5 415 aa18.57■□□□□ 0.56
VAMP4-202ENST00000367740 GJD2Q9UKL4 321 aa18.57■□□□□ 0.56
VAMP4-202ENST00000367740 AGTPBP1Q9UPW5 1226 aa18.57■□□□□ 0.56
VAMP4-202ENST00000367740 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
VAMP4-202ENST00000367740 MAP3K21Q5TCX8 1036 aa18.56■□□□□ 0.56
VAMP4-202ENST00000367740 DAGLAQ9Y4D2 1042 aa18.56■□□□□ 0.56
VAMP4-202ENST00000367740 MROH5Q6ZUA9 1318 aa18.55■□□□□ 0.56
VAMP4-202ENST00000367740 CAVIN4Q5BKX8 364 aa18.55■□□□□ 0.56
VAMP4-202ENST00000367740 TREML2Q5T2D2 321 aa18.55■□□□□ 0.56
VAMP4-202ENST00000367740 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
VAMP4-202ENST00000367740 MYLIPQ8WY64 445 aa18.55■□□□□ 0.56
VAMP4-202ENST00000367740 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
VAMP4-202ENST00000367740 ATAD5Q96QE3 1844 aa18.54■□□□□ 0.56
VAMP4-202ENST00000367740 TRIM75PA6NK02 468 aa18.54■□□□□ 0.56
VAMP4-202ENST00000367740 PRKAR2AP13861 404 aaKnown RBP18.54■□□□□ 0.56
VAMP4-202ENST00000367740 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
VAMP4-202ENST00000367740 SEMA6BQ9H3T3 888 aa18.54■□□□□ 0.56
VAMP4-202ENST00000367740 GRM8O00222 908 aa18.53■□□□□ 0.56
VAMP4-202ENST00000367740 DIXDC1Q155Q3 683 aa18.53■□□□□ 0.56
VAMP4-202ENST00000367740 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
VAMP4-202ENST00000367740 F6X3S4 739 aa18.52■□□□□ 0.56
VAMP4-202ENST00000367740 PLA2G5P39877 138 aa18.52■□□□□ 0.56
VAMP4-202ENST00000367740 CCDC84Q86UT8 332 aaPredicted RBP18.52■□□□□ 0.56
VAMP4-202ENST00000367740 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
VAMP4-202ENST00000367740 TTYH1Q9H313 450 aaPredicted RBP18.52■□□□□ 0.56
VAMP4-202ENST00000367740 TNFRSF10AO00220 468 aa18.51■□□□□ 0.55
VAMP4-202ENST00000367740 SLURP2P0DP57 97 aa18.51■□□□□ 0.55
VAMP4-202ENST00000367740 LBHD1Q9BQE6 289 aaPredicted RBP18.51■□□□□ 0.55
VAMP4-202ENST00000367740 RFX7Q2KHR2 1363 aa18.51■□□□□ 0.55
VAMP4-202ENST00000367740 MYH2Q9UKX2 1941 aa18.51■□□□□ 0.55
VAMP4-202ENST00000367740 GCLCP48506 637 aaPredicted RBP18.5■□□□□ 0.55
VAMP4-202ENST00000367740 LRRC24Q50LG9 513 aa18.5■□□□□ 0.55
VAMP4-202ENST00000367740 LHX8Q68G74 356 aa18.5■□□□□ 0.55
VAMP4-202ENST00000367740 FOSL2P15408 326 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 CYP2B6P20813 491 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 MAP3K10Q02779 954 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 TJAP1Q5JTD0 557 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 SH3BP5LQ7L8J4 393 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 PROCA1Q8NCQ7 364 aaPredicted RBP18.49■□□□□ 0.55
VAMP4-202ENST00000367740 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 USP40Q9NVE5 1235 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
VAMP4-202ENST00000367740 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
VAMP4-202ENST00000367740 CTNND1O60716 968 aaKnown RBP18.48■□□□□ 0.55
VAMP4-202ENST00000367740 PDE8BO95263 885 aa18.48■□□□□ 0.55
VAMP4-202ENST00000367740 PRDX5P30044 214 aa18.48■□□□□ 0.55
VAMP4-202ENST00000367740 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms