RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 LMNB1P20700 586 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 TNNI2P48788 182 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 PRSS12P56730 875 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ARHGAP4P98171 946 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L24Q0WX57 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 GRAPQ13588 217 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 CCDC152Q4G0S7 254 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 EPHA10Q5JZY3 1008 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 TTLL11Q8NHH1 800 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 GRAPLQ8TC17 118 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 UBE2Q2Q8WVN8 375 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 BCL11AQ9H165 835 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 BIN2Q9UBW5 565 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 CHMP3Q9Y3E7 222 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ARAP2Q8WZ64 1704 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ADAMTSL1Q8N6G6 1762 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L5A8MUK1 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 TNFRSF10AO00220 468 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ALDH1L1O75891 902 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ITGA6P23229 1130 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ARID4AP29374 1257 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 SLC19A1P41440 591 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 FOXO4P98177 505 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 NCOA4Q13772 614 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 DIXDC1Q155Q3 683 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 OCLNQ16625 522 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 SOGA3Q5TF21 947 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 TYW1BQ6NUM6 668 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ATF7IPQ6VMQ6 1270 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 NUDT18Q6ZVK8 323 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 METTL16Q86W50 562 aaKnown RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 KAZALD1Q96I82 304 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 SUCLG2Q96I99 432 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 GPR101Q96P66 508 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 EPAS1Q99814 870 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 LNPKQ9C0E8 428 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 BICC1Q9H694 974 aaKnown RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 GMPR2Q9P2T1 348 aaKnown RBP3.93□□□□□ -1.78
PTPRC-203ENST00000367367 SEPT3Q9UH03 358 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 ATP6V0A2Q9Y487 856 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 LTBP3Q9NS15 1303 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 TRPM7Q96QT4 1865 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 AK9Q5TCS8 1911 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ANKRD62A6NC57 917 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 WTIPA6NIX2 430 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 FDX1P10109 184 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 RLBP1P12271 317 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 RPS8P62241 208 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 FKBP4Q02790 459 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 AOC3Q16853 763 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 SLFNL1Q499Z3 407 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PRPF38BQ5VTL8 546 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 LMBR1LQ6UX01 489 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 RTKN2Q8IZC4 609 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 DHX38Q92620 1227 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 MEIS3Q99687 375 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 OCSTAMPQ9BR26 566 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PLA2G12BQ9BX93 195 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 API5Q9BZZ5 524 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 USP44Q9H0E7 712 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 TMEM134Q9H6X4 195 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 NSFL1CQ9UNZ2 370 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 RTL9Q8NET4 1388 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PPIP5K2O43314 1243 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PLIN1O60240 522 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PRMT3O60678 531 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 BBOX1O75936 387 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ATP2B4P23634 1241 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 VAMP1P23763 118 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 BRD2P25440 801 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 GJA5P36382 358 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 IARSP41252 1262 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 CCT4P50991 539 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 GPSM2P81274 684 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 SEMA3FQ13275 785 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 MRPL58Q14197 206 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ZKSCAN2Q63HK3 967 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 DPP8Q6V1X1 898 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ANKRD18AQ8IVF6 992 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 SP8Q8IXZ3 490 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 MPNDQ8N594 471 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ANKRD44Q8N8A2 993 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 RBM46Q8TBY0 533 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PIK3R5Q8WYR1 880 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 UBXN4Q92575 508 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 VTI1AQ96AJ9 217 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF594Q96JF6 807 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 CDC5LQ99459 802 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 PSMD1Q99460 953 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 TMX4Q9H1E5 349 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 NMRK2Q9NPI5 230 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ANKIB1Q9P2G1 1089 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 MKRN1Q9UHC7 482 aaKnown RBP3.92□□□□□ -1.78
PTPRC-203ENST00000367367 MYH2Q9UKX2 1941 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 UTYO14607 1347 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF541Q9H0D2 1346 aa3.92□□□□□ -1.78
PTPRC-203ENST00000367367 AKAP11Q9UKA4 1901 aa3.91□□□□□ -1.78
PTPRC-203ENST00000367367 SNAP23O00161 211 aa3.91□□□□□ -1.78
PTPRC-203ENST00000367367 IPO8O15397 1037 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms