RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
CTSD-202ENST00000367196 GPR75-ASB3A0A0A6YYF3 556 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 PDHXO00330 501 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 CXCL11O14625 94 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
CTSD-202ENST00000367196 PRMT2P55345 433 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 PICALMQ13492 652 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 SLC9C1Q4G0N8 1177 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
CTSD-202ENST00000367196 PARK7Q99497 189 aaKnown RBP18.24■□□□□ 0.51
CTSD-202ENST00000367196 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
CTSD-202ENST00000367196 TMEM106CQ9BVX2 250 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 RAI14Q9P0K7 980 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 DOCK1Q14185 1865 aa18.24■□□□□ 0.51
CTSD-202ENST00000367196 HTTP42858 3142 aa18.23■□□□□ 0.51
CTSD-202ENST00000367196 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
CTSD-202ENST00000367196 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
CTSD-202ENST00000367196 POLA2Q14181 598 aa18.23■□□□□ 0.51
CTSD-202ENST00000367196 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
CTSD-202ENST00000367196 ZFPM1Q8IX07 1006 aa18.23■□□□□ 0.51
CTSD-202ENST00000367196 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
CTSD-202ENST00000367196 KIAA0100Q14667 2235 aaKnown RBP18.22■□□□□ 0.51
CTSD-202ENST00000367196 PHF20L1A8MW92 1017 aa18.22■□□□□ 0.51
CTSD-202ENST00000367196 IGSF3O75054 1194 aa18.22■□□□□ 0.51
CTSD-202ENST00000367196 MAP3K10Q02779 954 aa18.22■□□□□ 0.51
CTSD-202ENST00000367196 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
CTSD-202ENST00000367196 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
CTSD-202ENST00000367196 SSH3Q8TE77 659 aa18.22■□□□□ 0.51
CTSD-202ENST00000367196 NSUN4Q96CB9 384 aaKnown RBP18.22■□□□□ 0.51
CTSD-202ENST00000367196 TBC1D12O60347 775 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 PTPRAP18433 802 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 HOXD10P28358 340 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 MCAMP43121 646 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 C17orf99Q6UX52 265 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 MIER1Q8N108 512 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 ZNF333Q96JL9 665 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 PTCH2Q9Y6C5 1203 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
CTSD-202ENST00000367196 DDTLA6NHG4 134 aaPredicted RBP18.2■□□□□ 0.5
CTSD-202ENST00000367196 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
CTSD-202ENST00000367196 BAG3O95817 575 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 PLCG2P16885 1265 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 RHBDL3P58872 404 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 SH3BP5LQ7L8J4 393 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
CTSD-202ENST00000367196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.2■□□□□ 0.5
CTSD-202ENST00000367196 ZHX2Q9Y6X8 837 aa18.2■□□□□ 0.5
CTSD-202ENST00000367196 A0A0G2JLL6 359 aaPredicted RBP18.19■□□□□ 0.5
CTSD-202ENST00000367196 CAP1Q01518 475 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 PRRT2Q7Z6L0 340 aaPredicted RBP18.19■□□□□ 0.5
CTSD-202ENST00000367196 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.53e-9■■■■□ 25.5
CTSD-202ENST00000367196 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 SLC45A1Q9Y2W3 748 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 CENPFP49454 3210 aa18.19■□□□□ 0.5
CTSD-202ENST00000367196 PTPRFP10586 1907 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 POTEFA5A3E0 1075 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 SLC34A2O95436 690 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 MS4A1P11836 297 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 MOGSQ13724 837 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
CTSD-202ENST00000367196 TEX11Q8IYF3 940 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 ZNF384Q8TF68 577 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
CTSD-202ENST00000367196 OSBPL5Q9H0X9 879 aaPredicted RBP18.18■□□□□ 0.5
CTSD-202ENST00000367196 AFG3L2Q9Y4W6 797 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 ADGRA2Q96PE1 1338 aa18.18■□□□□ 0.5
CTSD-202ENST00000367196 PSMC4P43686 418 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 SLC4A8Q2Y0W8 1093 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 GADL1Q6ZQY3 521 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 ARHGAP39Q9C0H5 1083 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 DHX36Q9H2U1 1008 aaKnown RBP18.17■□□□□ 0.5
CTSD-202ENST00000367196 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
CTSD-202ENST00000367196 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
CTSD-202ENST00000367196 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 ZBTB7BO15156 539 aaPredicted RBP18.16■□□□□ 0.5
CTSD-202ENST00000367196 FMNL1O95466 1100 aaPredicted RBP18.16■□□□□ 0.5
CTSD-202ENST00000367196 FCGRTP55899 365 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 HERC5Q9UII4 1024 aaKnown RBP18.16■□□□□ 0.5
CTSD-202ENST00000367196 PNMA3Q9UL41 463 aa18.16■□□□□ 0.5
CTSD-202ENST00000367196 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 TRIM75PA6NK02 468 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 GPAT2Q6NUI2 795 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 CERS3Q8IU89 383 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 RAET1EQ8TD07 263 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 SMCR8Q8TEV9 937 aaPredicted RBP18.15■□□□□ 0.5
CTSD-202ENST00000367196 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
CTSD-202ENST00000367196 SNRKQ9NRH2 765 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms