RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 LEFTY1O75610 366 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 PAPLNO95428 1278 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 NEFMP07197 916 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 MAPK1P28482 360 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 BNIP3Q12983 259 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 NXPE4Q6UWF7 544 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 ARHGAP27Q6ZUM4 889 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 WFDC3Q8IUB2 231 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 ISL2Q96A47 359 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 DUSP23Q9BVJ7 150 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 CBX8Q9HC52 389 aa4.75□□□□□ -1.65
RNU4-42P-201ENST00000364738 SUPT5HO00267 1087 aaKnown RBP4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 CEACAM5P06731 702 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 NME2P22392 152 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 ARNTP27540 789 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 ENOX2Q16206 610 aaKnown RBP4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 IFI16Q16666 785 aaKnown RBP4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 ZC3H12AQ5D1E8 599 aaKnown RBP4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 GPBAR1Q8TDU6 330 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 PCOLCE2Q9UKZ9 415 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 U3KQE9 123 aa4.74□□□□□ -1.65
RNU4-42P-201ENST00000364738 BIN1O00499 593 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 TREHO43280 583 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 CD8BP10966 210 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 ITIH2P19823 946 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 FUT4P22083 530 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 CD96P40200 585 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 ERVK-24P63145 666 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 POU5F2Q8N7G0 328 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 RNF214Q8ND24 703 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 HRASLS5Q96KN8 279 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 EMILIN2Q9BXX0 1053 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 RC3H2Q9HBD1 1191 aaKnown RBP4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 MKNK2Q9HBH9 465 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 VAV3Q9UKW4 847 aa4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 GNEQ9Y223 722 aaKnown RBP4.73□□□□□ -1.65
RNU4-42P-201ENST00000364738 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 C8AP07357 584 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 GSTT1P30711 240 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 OXCT1P55809 520 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 PLCB3Q01970 1234 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 PRKCQQ04759 706 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 ZNF252P-AS1Q0IIN9 211 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 DSC3Q14574 896 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 AOC3Q16853 763 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 TPTE2Q6XPS3 522 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 C3orf58Q8NDZ4 430 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 CEP44Q9C0F1 390 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 PICK1Q9NRD5 415 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 MBNL3Q9NUK0 354 aaKnown RBP4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 SAMM50Q9Y512 469 aa4.72□□□□□ -1.65
RNU4-42P-201ENST00000364738 ARID1BQ8NFD5 2236 aaPredicted RBP4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 TMEM265A0A087WTH1 108 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 FBXO24O75426 580 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 BRD1O95696 1058 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 RNASE1P07998 156 aaKnown RBP4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 MAPK8P45983 427 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 FZD5Q13467 585 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 PPM1JQ5JR12 505 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 ANGEL2Q5VTE6 544 aaKnown RBP4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 FBF1Q8TES7 1133 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 NECAB3Q96P71 396 aaPredicted RBP4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 ADAMTS6Q9UKP5 1117 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 CSADQ9Y600 493 aa4.71□□□□□ -1.66
RNU4-42P-201ENST00000364738 DCDC2CA8MYV0 355 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 ENC1O14682 589 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 PAGE1O75459 146 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 JAG1P78504 1218 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 LLGL2Q6P1M3 1020 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 MPRIPQ6WCQ1 1025 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 ATG4DQ86TL0 474 aaPredicted RBP4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 LRRN4CLQ8ND94 238 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 PI4K2BQ8TCG2 481 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 GRIN3AQ8TCU5 1115 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 SRCIN1Q9C0H9 1055 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 PRDM10Q9NQV6 1147 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 PPM1HQ9ULR3 514 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 PLAGL2Q9UPG8 496 aa4.7□□□□□ -1.66
RNU4-42P-201ENST00000364738 TRIM37O94972 964 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 NTF4P34130 210 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 ERICH6Q7L0X2 663 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 FAM168AQ92567 244 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 HEXIM2Q96MH2 286 aaKnown RBP4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 SETDB2Q96T68 719 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 TNKS2Q9H2K2 1166 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 CACNA2D2Q9NY47 1150 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 GTF2IRD1Q9UHL9 959 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 CARMIL2Q6F5E8 1435 aa4.69□□□□□ -1.66
RNU4-42P-201ENST00000364738 GNAT3A8MTJ3 354 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 FANCGO15287 622 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 ATP2B2Q01814 1243 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 FMR1Q06787 632 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 IKZF1Q13422 519 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 LRRC14Q15048 493 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 ZNF648Q5T619 568 aaPredicted RBP4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 SLC23A3Q6PIS1 610 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms