RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 VAV3Q9UKW4 847 aa3.33□□□□□ -1.88
RNU4-41P-201ENST00000364426 PCOLCE2Q9UKZ9 415 aa3.33□□□□□ -1.88
RNU4-41P-201ENST00000364426 PPM1HQ9ULR3 514 aa3.33□□□□□ -1.88
RNU4-41P-201ENST00000364426 PAPLNO95428 1278 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 NEFMP07197 916 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 FUT4P22083 530 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 ZNF157P51786 506 aaPredicted RBP3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 OXCT1P55809 520 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 PLCB3Q01970 1234 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 PRKCQQ04759 706 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 RING1Q06587 406 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 FMR1Q06787 632 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 CDK5R2Q13319 367 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 OGFOD2Q6N063 350 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 PI16Q6UXB8 463 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 SPRED2Q7Z698 418 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 STK35Q8TDR2 534 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 NECAB3Q96P71 396 aaPredicted RBP3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 DUSP23Q9BVJ7 150 aa3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 ZC3H12CQ9C0D7 883 aaKnown RBP3.32□□□□□ -1.88
RNU4-41P-201ENST00000364426 PNMA6FA0A0J9YX94 578 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 IGF2BP3O00425 579 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 GIPC1O14908 333 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 TRIM37O94972 964 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 GSTT1P30711 240 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 NTF4P34130 210 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 IFI16Q16666 785 aaKnown RBP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 ZNF792Q3KQV3 632 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 NXPE4Q6UWF7 544 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 ZNF574Q6ZN55 896 aaPredicted RBP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 FAM214BQ7L5A3 538 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 ATG4DQ86TL0 474 aaPredicted RBP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 PLD6Q8N2A8 252 aaKnown RBP3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 GPBAR1Q8TDU6 330 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 KCNB2Q92953 911 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 ISL2Q96A47 359 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 TNKS2Q9H2K2 1166 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 SNX11Q9Y5W9 270 aa3.31□□□□□ -1.88
RNU4-41P-201ENST00000364426 TMEM265A0A087WTH1 108 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 BIN1O00499 593 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 ENC1O14682 589 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 FANCGO15287 622 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 LEFTY1O75610 366 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 CEACAM5P06731 702 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 CD8BP10966 210 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 HCLS1P14317 486 aaPredicted RBP3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 BMP6P22004 513 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 MAPK1P28482 360 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 PLCL1Q15111 1095 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 MAP1SQ66K74 1059 aaPredicted RBP3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 ALG1LQ6GMV1 187 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 FAM181AQ8N9Y4 354 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 HRASLS5Q96KN8 279 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 ASB16Q96NS5 453 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 CEP44Q9C0F1 390 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 LGR6Q9HBX8 967 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 PLAGL2Q9UPG8 496 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 AKAP2Q9Y2D5 859 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 SAMM50Q9Y512 469 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 U3KQE9 123 aa3.3□□□□□ -1.88
RNU4-41P-201ENST00000364426 ARID1BQ8NFD5 2236 aaPredicted RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 CARMIL2Q6F5E8 1435 aa3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 RNGTTO60942 597 aaKnown RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 BNIP3Q12983 259 aa3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 FZD5Q13467 585 aa3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 ZSCAN29Q8IWY8 852 aaPredicted RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 HEXIM2Q96MH2 286 aaKnown RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 OSBPL7Q9BZF2 842 aa3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 MBNL3Q9NUK0 354 aaKnown RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 BIN2Q9UBW5 565 aaPredicted RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 GTF2IRD1Q9UHL9 959 aa3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.29□□□□□ -1.88
RNU4-41P-201ENST00000364426 PAGE1O75459 146 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 C8AP07357 584 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 RNASE1P07998 156 aaKnown RBP3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 CAP2P40123 477 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 JAG1P78504 1218 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 LRRC14Q15048 493 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 ANGEL2Q5VTE6 544 aaKnown RBP3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 LLGL2Q6P1M3 1020 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 SLC23A3Q6PIS1 610 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 TOP6BLQ8N6T0 577 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 KCT2Q8NC54 265 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 FLAD1Q8NFF5 587 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 TMEM40Q8WWA1 233 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 FRMD6Q96NE9 622 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 ARID3AQ99856 593 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 PRDM10Q9NQV6 1147 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 ADAMTS6Q9UKP5 1117 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 CYP8B1Q9UNU6 501 aa3.28□□□□□ -1.88
RNU4-41P-201ENST00000364426 SUPT5HO00267 1087 aaKnown RBP3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 CLCN7P51798 805 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 KCNA1Q09470 495 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 AOC3Q16853 763 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 PPM1JQ5JR12 505 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 ZBTB37Q5TC79 503 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 RASIP1Q5U651 963 aa3.27□□□□□ -1.89
RNU4-41P-201ENST00000364426 MPRIPQ6WCQ1 1025 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms