RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.09
VAMP1-201ENST00000361716 VSTM4Q8IW00 320 aa14.46□□□□□ -0.09
VAMP1-201ENST00000361716 EFCAB13Q8IY85 973 aa14.46□□□□□ -0.09
VAMP1-201ENST00000361716 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
VAMP1-201ENST00000361716 GCKRQ14397 625 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 NCAPHQ15003 741 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 SLC35F6Q8N357 371 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 CEP112Q8N8E3 955 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 ANKZF1Q9H8Y5 726 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 NFE2L3Q9Y4A8 694 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 CAPN7Q9Y6W3 813 aa14.46□□□□□ -0.1
VAMP1-201ENST00000361716 GOLGA6L9A6NEM1 432 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 E7EWF7 191 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 ENC1O14682 589 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 GBP6Q6ZN66 633 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 KAZALD1Q96I82 304 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 ZNF496Q96IT1 587 aaPredicted RBP14.45□□□□□ -0.1
VAMP1-201ENST00000361716 PSD3Q9NYI0 1048 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 NALCNQ8IZF0 1738 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 LRRIQ3A6PVS8 624 aaPredicted RBP14.45□□□□□ -0.1
VAMP1-201ENST00000361716 ZEB2O60315 1214 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 PPFIA4O75335 1185 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 PPP2R5AQ15172 486 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 PI16Q6UXB8 463 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 BCAS4Q8TDM0 211 aa14.45□□□□□ -0.1
VAMP1-201ENST00000361716 NEURL1BA8MQ27 555 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 INPP5BP32019 993 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 LINC00301Q8NCQ3 95 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 KCNG4Q8TDN1 519 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 UBXN6Q9BZV1 441 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
VAMP1-201ENST00000361716 A0A087WUV0 522 aaPredicted RBP14.44□□□□□ -0.1
VAMP1-201ENST00000361716 FOXN1O15353 648 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 PRC1O43663 620 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 KIAA0754O94854 1291 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 MATR3P43243 847 aaKnown RBP eCLIP14.44□□□□□ -0.1
VAMP1-201ENST00000361716 NAA16Q6N069 864 aaPredicted RBP14.44□□□□□ -0.1
VAMP1-201ENST00000361716 CEP57Q86XR8 500 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 NOA1Q8NC60 698 aaKnown RBP14.44□□□□□ -0.1
VAMP1-201ENST00000361716 FAM71BQ8TC56 605 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 GUCA1BQ9UMX6 200 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 SHTN1A0MZ66 631 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 ACRBPQ8NEB7 543 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 NUP133Q8WUM0 1156 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 C19orf44Q9H6X5 657 aa14.44□□□□□ -0.1
VAMP1-201ENST00000361716 CTDNEP1O95476 244 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 PSEN1P49768 467 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 CMTR1Q8N1G2 835 aaKnown RBP14.43□□□□□ -0.1
VAMP1-201ENST00000361716 IGSF22Q8N9C0 903 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 GBP3Q9H0R5 595 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 CDC23Q9UJX2 597 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 FAM169AQ9Y6X4 670 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 PDIA3P30101 505 aaKnown RBP14.43□□□□□ -0.1
VAMP1-201ENST00000361716 LRRC24Q50LG9 513 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 SPECC1LQ69YQ0 1117 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 GRAMD1CQ8IYS0 662 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 IP6K1Q92551 441 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 CEP126Q9P2H0 1117 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 ATP2C2O75185 946 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 PIP4K2BP78356 416 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 IMMTQ16891 758 aaKnown RBP14.43□□□□□ -0.1
VAMP1-201ENST00000361716 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 L1RE1Q9UN81 338 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 PCDHA5Q9Y5H7 936 aa14.43□□□□□ -0.1
VAMP1-201ENST00000361716 DLG5Q8TDM6 1919 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 MAP2K7O14733 419 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 HNRNPH1P31943 449 aaKnown RBP14.42□□□□□ -0.1
VAMP1-201ENST00000361716 USP8P40818 1118 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 SAMSN1Q9NSI8 373 aaKnown RBP14.42□□□□□ -0.1
VAMP1-201ENST00000361716 CHD2O14647 1828 aaKnown RBP14.42□□□□□ -0.1
VAMP1-201ENST00000361716 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
VAMP1-201ENST00000361716 CABP4P57796 275 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 ALG1Q9BT22 464 aa14.42□□□□□ -0.1
VAMP1-201ENST00000361716 PUS3Q9BZE2 481 aaKnown RBP14.42□□□□□ -0.1
VAMP1-201ENST00000361716 GCP02774 474 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 CHRM1P11229 460 aaPredicted RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 EIF5P55010 431 aaKnown RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 ZNF790Q6PG37 636 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 FAM76AQ8TAV0 307 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 KAT2BQ92831 832 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 KCND1Q9NSA2 647 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 AKR1B15C9JRZ8 316 aaPredicted RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 ZNF213O14771 459 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 PFKFB2O60825 505 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 PDE4BQ07343 736 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 KIFC2Q96AC6 838 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 MARF1Q9Y4F3 1742 aaKnown RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 GOLGA6CA6NDK9 693 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 EXOC5O00471 708 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 STX10O60499 249 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 GOLGA6DP0CG33 693 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms