RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PDLIM2Q96JY6 352 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 SPON1Q9HCB6 807 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 SYCE3A1L190 88 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 EVX2Q03828 476 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 CRNKL1Q9BZJ0 848 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 ALDH8A1Q9H2A2 487 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 INCENPQ9NQS7 918 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 BCS1LQ9Y276 419 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 PSME4Q14997 1843 aa15.47■□□□□ 0.07
SQSTM1-201ENST00000360718 BAG3O95817 575 aa15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 TPM2P07951 284 aa15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 FGD1P98174 961 aa15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 TRDNQ13061 729 aa15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 ZSCAN31Q96LW9 406 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 SUGT1Q9Y2Z0 365 aa15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-201ENST00000360718 NFKBIEO00221 500 aa15.46■□□□□ 0.06
SQSTM1-201ENST00000360718 CTDSPL2Q05D32 466 aa15.46■□□□□ 0.06
SQSTM1-201ENST00000360718 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.06
SQSTM1-201ENST00000360718 RALYLQ86SE5 291 aaKnown RBP15.46■□□□□ 0.06
SQSTM1-201ENST00000360718 CERS3Q8IU89 383 aa15.46■□□□□ 0.06
SQSTM1-201ENST00000360718 LAMB1P07942 1786 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 CYP2D7A0A087X1C5 515 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 LARGE1O95461 756 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 TOB2Q14106 344 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 NCOA7Q8NI08 942 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 TTF2Q9UNY4 1162 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 TIAM2Q8IVF5 1701 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 GAKO14976 1311 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 MCM5P33992 734 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 BTDP43251 543 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 SCNN1DP51172 638 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 PPP4CP60510 307 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 LARGE2Q8N3Y3 721 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 FAM163AQ96GL9 167 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 DCP1AQ9NPI6 582 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 NOL7Q9UMY1 257 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 DAGLAQ9Y4D2 1042 aa15.45■□□□□ 0.06
SQSTM1-201ENST00000360718 ARFGEF1Q9Y6D6 1849 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 GPR75-ASB3A0A0A6YYF3 556 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 GIMAP6Q6P9H5 292 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 SH2B1Q9NRF2 756 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 PCDHAC2Q9Y5I4 1007 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 NEDD4P46934 1319 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
SQSTM1-201ENST00000360718 PRELPP51888 382 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 STK11IPQ8N1F8 1099 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 FHDC1Q9C0D6 1143 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 MKRN1Q9UHC7 482 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 OFD1O75665 1012 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 RHBDL3P58872 404 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 CTR9Q6PD62 1173 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 Q6ZUG5 572 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 MB21D2Q8IYB1 491 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 MYH1P12882 1939 aa15.43■□□□□ 0.06
SQSTM1-201ENST00000360718 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 PLCG2P16885 1265 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 IARSP41252 1262 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 ANTXR2P58335 489 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 PPARAQ07869 468 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 CNNM2Q9H8M5 875 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 TPCN1Q9ULQ1 816 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 FOCADQ5VW36 1801 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 MINDY4BA8MYZ0 360 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L21D6R901 530 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 RAD17O75943 681 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 CYP2D6P10635 497 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 RASSF7Q02833 373 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 TMEM87AQ8NBN3 555 aa15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-201ENST00000360718 ECM29Q5VYK3 1845 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 DDX60LQ5H9U9 1706 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 ZNF500O60304 480 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 DTNBO60941 627 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 ZSCAN22P10073 491 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 USP5P45974 858 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms