RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 IKBKBO14920 756 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 KRT32Q14532 448 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 PROSER3Q2NL68 480 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 SMYD4Q8IYR2 804 aaPredicted RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 BPIFA3Q9BQP9 254 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 SHTN1A0MZ66 631 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 PRAMEF22A3QJZ6 481 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 AKR1B15C9JRZ8 316 aaPredicted RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 HIP1O00291 1037 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 KIF3CO14782 793 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 CASP14P31944 242 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 USP5P45974 858 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 SHC4Q6S5L8 630 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 METTL16Q86W50 562 aaKnown RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 SH2D3CQ8N5H7 860 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 OTUD6BQ8N6M0 293 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 MSANTD4Q8NCY6 345 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 CCDC148Q8NFR7 591 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 PSMB7Q99436 277 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 HPCAL4Q9UM19 191 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 TTC36A6NLP5 189 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 PES1O00541 588 aaKnown RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 PRPF6O94906 941 aaKnown RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 CPP00450 1065 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 CTCFLQ8NI51 663 aaPredicted RBP9.79□□□□□ -0.84
CD46-206ENST00000360212 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
CD46-206ENST00000360212 ERCC6L2Q5T890 1561 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 ADGRL3Q9HAR2 1447 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 A0A1W2PQ27 194 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 A0A1W2PQ64 194 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 A0A1W2PQD8 194 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 GNAT3A8MTJ3 354 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
CD46-206ENST00000360212 ZNF185O15231 689 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 C11orf91Q3C1V1 193 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 CAGE1Q8TC20 777 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 MIEF2Q96C03 454 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 RRP36Q96EU6 259 aaKnown RBP9.78□□□□□ -0.84
CD46-206ENST00000360212 SCLT1Q96NL6 688 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 MMS19Q96T76 1030 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 NAPGQ99747 312 aaPredicted RBP9.78□□□□□ -0.84
CD46-206ENST00000360212 CAPS2Q9BXY5 557 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 HOOK1Q9UJC3 728 aaKnown RBP9.78□□□□□ -0.84
CD46-206ENST00000360212 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 PTPRMP28827 1452 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 ALDH1L1O75891 902 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 KIAA0754O94854 1291 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 RAPGEF3O95398 923 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 NF2P35240 595 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.844e-21■■■■□ 19.4
CD46-206ENST00000360212 INHBEP58166 350 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 ZKSCAN8Q15776 578 aaPredicted RBP9.78□□□□□ -0.84
CD46-206ENST00000360212 TBC1D22AQ8WUA7 517 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 TUBGCP6Q96RT7 1819 aa9.78□□□□□ -0.84
CD46-206ENST00000360212 IFT172Q9UG01 1749 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 GOLGA6BA6NDN3 693 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 USP8P40818 1118 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 GRIN1Q05586 938 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 SLC9C2Q5TAH2 1124 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 STAMQ92783 540 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 CABS1Q96KC9 395 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 GBP3Q9H0R5 595 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 C19orf44Q9H6X5 657 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 MYO6Q9UM54 1294 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.84
CD46-206ENST00000360212 CPS1P31327 1500 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 KLF18A0A0U1RQI7 1052 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 POTEB2H3BUK9 544 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 BACH1O14867 736 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 PPP1R12BO60237 982 aaPredicted RBP9.77□□□□□ -0.85
CD46-206ENST00000360212 CMA1P23946 247 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 PEX19P40855 299 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
CD46-206ENST00000360212 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.85
CD46-206ENST00000360212 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
CD46-206ENST00000360212 SND1Q7KZF4 910 aaKnown RBP eCLIP9.77□□□□□ -0.859e-12■■■■□ 20.8
CD46-206ENST00000360212 PHKBQ93100 1093 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 LGR6Q9HBX8 967 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
CD46-206ENST00000360212 PREX1Q8TCU6 1659 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 MED23Q9ULK4 1368 aa9.77□□□□□ -0.85
CD46-206ENST00000360212 ELF1P32519 619 aa9.76□□□□□ -0.85
CD46-206ENST00000360212 FXR1P51114 621 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD46-206ENST00000360212 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
CD46-206ENST00000360212 ZKSCAN4Q969J2 545 aaPredicted RBP9.76□□□□□ -0.85
CD46-206ENST00000360212 SELENOOQ9BVL4 669 aa9.76□□□□□ -0.85
CD46-206ENST00000360212 IRAK4Q9NWZ3 460 aa9.76□□□□□ -0.85
CD46-206ENST00000360212 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
CD46-206ENST00000360212 E7EWF7 191 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms