RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 WWC3Q9ULE0 1092 aa13.98□□□□□ -0.17
COL20A1-201ENST00000358894 MCM7P33993 719 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 STAMQ92783 540 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 LMAN1P49257 510 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 CARD10Q9BWT7 1032 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 PXDNLA1KZ92 1463 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 DEXIO95424 95 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 KRT2P35908 639 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 FAM193AP78312 1265 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 PTPN21Q16825 1174 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 CERS3Q8IU89 383 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-201ENST00000358894 PIGBQ92521 554 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 PLIN2Q99541 437 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 FEZ1Q99689 392 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 OGFRQ9NZT2 677 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 VPS54Q9P1Q0 977 aa13.97□□□□□ -0.17
COL20A1-201ENST00000358894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-201ENST00000358894 HLFQ16534 295 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 ZNF827Q17R98 1081 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 APOA5Q6Q788 366 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 NFE2L3Q9Y4A8 694 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 CUTAO60888 179 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 HEATR3Q7Z4Q2 680 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 LRRC8AQ8IWT6 810 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 LZTFL1Q9NQ48 299 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
COL20A1-201ENST00000358894 C6orf229H3BNL8 230 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
COL20A1-201ENST00000358894 IDEP14735 1019 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 GYG1P46976 350 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.18
COL20A1-201ENST00000358894 NLRP10Q86W26 655 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 LINC00301Q8NCQ3 95 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.18
COL20A1-201ENST00000358894 TFCP2L1Q9NZI6 479 aa13.96□□□□□ -0.18
COL20A1-201ENST00000358894 SCARF1Q14162 830 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 ARID5BQ14865 1188 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 C10orf67Q8IYJ2 551 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 FOXO4P98177 505 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 ZMYM6O95789 1325 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 RTL9Q8NET4 1388 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 ERLIN1O75477 346 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
COL20A1-201ENST00000358894 STAT6P42226 847 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 TCP11L1Q9NUJ3 509 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 SPATA31A3Q5VYP0 1347 aa13.95□□□□□ -0.18
COL20A1-201ENST00000358894 BAG3O95817 575 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 CMA1P23946 247 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 MCAMP43121 646 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 TRIM47Q96LD4 638 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 RUFY1Q96T51 708 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 ZNF609O15014 1411 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 PRKAB2O43741 272 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 RDXP35241 583 aaKnown RBP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 ADD2P35612 726 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 ELF2Q15723 593 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 PARP10Q53GL7 1025 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 TTLL11Q8NHH1 800 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 BMP15O95972 392 aa13.94□□□□□ -0.18
COL20A1-201ENST00000358894 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
COL20A1-201ENST00000358894 GOLGA6L9A6NEM1 432 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 MTIF2P46199 727 aaKnown RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 NOSTRINQ8IVI9 506 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 BAG1Q99933 345 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 SERTAD1Q9UHV2 236 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 RFC4P35249 363 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 PIK3AP1Q6ZUJ8 805 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 POSTNQ15063 836 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 CENPHQ9H3R5 247 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 GOLPH3LQ9H4A5 285 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
COL20A1-201ENST00000358894 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-201ENST00000358894 MED23Q9ULK4 1368 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
COL20A1-201ENST00000358894 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms